Birch, D. J. S., M. Levitus, and Y. Mély 2021. “MAF and fluorescence play their part,” Methods and Applications in Fluorescence, 9/1 (2021), 010401 (DOI: 10.1088/2050-6120/abce06).

Charles, Y. P., Y. Ntilikina, A. Collinet, S. Schuller, J. Garnon, J. Godet, and P. Clavert 2021. “Accuracy and technical limits of percutaneous pedicle screw placement in the thoracolumbar spine,” Surgical and Radiologic Anatomy, (2021) (DOI: 10.1007/s00276-020-02673-7).

Mukherjee, S., E. Boutant, E. Réal, Y. Mély, and H. Anton 2021. “Imaging Viral Infection by Fluorescence Microscopy: Focus on HIV-1 Early Stage,” Viruses, 13/2 (2021), 213 (DOI: 10.3390/v13020213).

Mukherjee, T., V. Soppina, L. Richert, Y. Mely, A. S. Klymchenko, M. Collot, and S. Kanvah 2021. “Live-Cell Imaging of Nucleolus and Mapping Mitochondrial Viscosity with a dual function fluorescent probe,” (2021) (DOI: 10.1039/d0ob02378g).

Tacquard, C., A. Mansour, A. Godon, J. Godet, J. Poissy, D. Garrigue, E. Kipnis, S. R. Hamada, P. M. Mertes, A. Steib, M. Ulliel-Roche, B. Bouhemad, M. Nguyen, F. Reizine, I. Gouin-Thibault, M. C. Besse, N. Collercandy, S. Mankikian, J. H. Levy, Y. Gruel, P. Albaladejo, S. Susen, and A. Godier 2021. “Impact of high dose prophylactic anticoagulation in critically ill patients with COVID-19 pneumonia,” Chest, (2021) (DOI: 10.1016/j.chest.2021.01.017).

Terasawa, K., Y. Kato, Y. Ikami, K. Sakamoto, K. Ohtake, S. Kusano, Y. Tomabechi, M. Kukimoto-Niino, M. Shirouzu, J. Guan, T. Kobayashi, T. Iwata, T. Watabe, S. Yokoyama, and M. Hara-Yokoyama 2021. “Direct homophilic interaction of LAMP-2A with the two-domain architecture revealed by site-directed photo-crosslinks and steric hindrances in mammalian cells,” (2021).

Tomishige, N., M. Murate, P. Didier, L. Richert, Y. Mely, and T. Kobayashi 2021. “The use of pore-forming toxins to image lipids and lipid domains,” in Methods in enzymology in press (2021).

Weiss, M., J. Fan, M. Claudel, T. Sonntag, P. Didier, C. Ronzani, L. Lebeau, and F. Pons 2021. “Density of surface charge is a more predictive factor of the toxicity of cationic carbon nanoparticles than zeta potential,” 19th (2021) (DOI: 10.1186/s12951-020-00747-7).

Wiszniewska, M., P. Dellis, V. van Kampen, H. Suojalehto, X. Munoz, J. Walusiak-Skorupa, I. Lindström, R. Merget, C. Romero-Mesones, J. Sastre, S. Quirce, P. Mason, C. Rifflart, J. Godet, F. de Blay, O. Vandenplas, P. Klusackova, D. Sherson, K. Suuronen, P. Hölttä, P. Kauppi, L. Hurdubaea, N. Migueres, R. Merget, A. M. Preisser, V. Harth, P. Maestrelli, G. Moscato, P. Pignatti, P. Paggiaro, D. Talini, M. Dell’Omo, I. Foletti, C. Svanes, J. Kirkeleit, A. Lipińska-Ojrzanowska, M. Fernandez-Nieto, D. Loli, P. Cullinan, J. Cannon, S. Burge, V. Moore, and J. Hoyle 2021. “Characterization of Occupational Eosinophilic Bronchitis in a Multicenter Cohort of Subjects with Work-Related Asthma Symptoms,” in Journal of allergy and clinical immunology: In practice, 9th, 2 (2021), 937–944.e4 (DOI: 10.1016/j.jaip.2020.08.056).


Blandin, A. F., E. Cruz Da Silva, M. C. Mercier, O. Glushonkov, P. Didier, S. Dedieu, C. Schneider, J. Devy, N. Etienne-Selloum, M. Dontenwill, L. Choulier, and M. Lehmann 2020. “Gefitinib induces EGFR and alpha5beta1 integrin co-endocytosis in glioblastoma cells,” (2020) (DOI: 10.1007/s00018-020-03686-6).

Boutant, E., J. Bonzi, H. Anton, M. B. Nasim, R. Cathagne, E. Réal, D. Dujardin, P. Carl, P. Didier, J. C. Paillart, R. Marquet, Y. Mély, H. de Rocquigny, and S. Bernacchi 2020. “Zinc Fingers in HIV-1 Gag Precursor Are Not Equivalent for gRNA Recruitment at the Plasma Membrane,” Biophysical Journal, 119/2 (2020), 419–433 (DOI: 10.1016/j.bpj.2020.05.035).

Chazal, N., H. de Rocquigny, P. Roussel, S. Bouaziz, F. Barré-Sinoussi, J. F. Delfraissy, and J. L. Darlix 2020. “The three lives of Pierre Boulanger,” Retrovirology, 17/1 (2020), 9 (DOI: 10.1186/s12977-020-00518-0).

Ciaco, S., N. Humbert, E. Real, C. Boudier, O. Francesconi, S. Roelens, C. Nativi, C. Seguin-Devaux, M. Mori, and Y. Mély 2020. “A Class of Potent Inhibitors of the HIV-1 Nucleocapsid Protein Based on Aminopyrrolic Scaffolds,” ACS Medicinal Chemistry Letters, 11/5 (2020), 698–705 (DOI: 10.1021/acsmedchemlett.9b00558).

Clément, C. M. H., M. S. Deffieu, C. M. Dorobantu, T. F. Baumert, N. V. Ayala-Nunez, Y. Mély, P. Ronde, and R. Gaudin 2020. “Characterisation of endogenous Claudin-1 expression, motility and susceptibility to hepatitis C virus in CRISPR knock-in cells,” Biology of the Cell, 112/5 (2020), 140–151 (DOI: 10.1111/boc.201900085).

De Almeida Barbosa, N. M., P. Gosset, E. Réal, V. Ledentu, P. Didier, and N. Ferré 2020. “PH-Dependent absorption spectrum of oxyluciferin analogues in the active site of firefly luciferase,” Physical Chemistry Chemical Physics, 22/38 (2020), 21731–21740 (DOI: 10.1039/d0cp02514c).

Didier, P., J. Kuchlyan, L. Martinez-Fernandez, P. Gosset, J. Leónard, Y. Tor, R. Improta, and Y. Mély 2020. “Deciphering the pH-dependence of ground- A nd excited-state equilibria of thienoguanine,” Physical Chemistry Chemical Physics, 22/14 (2020), 7381–7391 (DOI: 10.1039/c9cp06931c).

Fabacher, T., J. Godet, D. Klein, M. Velten, and J. Jegu 2020. “Machine learning application for incident prostate adenocarcinomas automatic registration in a French regional regional cancer registry,” International Journal of Medical Informatics, 139 (2020) (DOI: 10.1016/j.ijmedinf.2020.104139).

Fabacher, T., M. Schaeffer, N. Tuzin, F. Séverac, F. Lefebvre, M. Mielcarek, E. A. Sauleau, N. Meyer, and J. Godet 2020. “Medical biostatistics with GMRC Shiny Stats – learning by doing,” 78th (2020), 499–506 (DOI: 10.1016/j.pharma.2020.06.001).

Gosset, P., G. Taupier, O. Crégut, J. Brazard, Y. Mély, K. D. Dorkenoo, J. Léonard, and P. Didier 2020. “Excited-State Proton Transfer in Oxyluciferin and Its Analogues,” The journal of physical chemistry letters, 11/9 (2020), 3653–3659 (DOI: 10.1021/acs.jpclett.0c00839).

Grandbastien, M., A. Piotin, J. Godet, I. Abessolo-Amougou, C. Ederlé, I. Enache, P. Fraisse, T. C. Tu Hoang, L. Kassegne, A. Labani, P. Leyendecker, L. Manien, C. Marcot, G. Pamart, B. Renaud-Picard, M. Riou, V. Doyen, R. Kessler, S. Fafi-Kremer, C. Metz-Favre, N. Khayath, and F. de Blay 2020. “SARS-CoV-2 Pneumonia in Hospitalized Asthmatic Patients Did Not Induce Severe Exacerbation,” The Journal of Allergy and Clinical Immunology: In Practice, 8/8 (2020), 2600–2607 (DOI: 10.1016/j.jaip.2020.06.032).

Humbert, N., L. Kovalenko, F. Saladini, A. Giannini, M. Pires, T. Botzanowski, S. Cherenok, C. Boudier, K. K. Sharma, E. Real, O. A. Zaporozhets, S. Cianférani, C. Seguin-Devaux, F. Poggialini, M. Botta, M. Zazzi, V. I. Kalchenko, M. Mori, and Y. Mély 2020. “(Thia)calixarenephosphonic Acids as Potent Inhibitors of the Nucleic Acid Chaperone Activity of the HIV-1 Nucleocapsid Protein with a New Binding Mode and Multitarget Antiviral Activity,” ACS Infectious Diseases, 6/4 (2020), 687–702 (DOI: 10.1021/acsinfecdis.9b00290).

Karnib, H., M. F. Nadeem, N. Humbert, K. K. Sharma, N. Grytsyk, C. Tisné, E. Boutant, T. Lequeu, E. Réal, C. Boudier, H. De Rocquigny, and Y. Mély 2020. “The nucleic acid chaperone activity of the HIV-1 Gag polyprotein is boosted by its cellular partner RPL7: A kinetic study,” Nucleic Acids Research, 48/16 (2020), 9218–9234 (DOI: 10.1093/nar/gkaa659).

Kavand, A., C. Blanck, F. Przybilla, Y. Mély, N. Anton, T. Vandamme, C. A. Serra, and D. Chan-Seng 2020. “Investigating the growth of hyperbranched polymers by self-condensing vinyl RAFT copolymerization from the surface of upconversion nanoparticles,” Polymer Chemistry, 11/26 (2020), 4313–4325 (DOI: 10.1039/d0py00452a).

Khiralla, A., R. Spina, M. Varbanov, S. Philippot, P. Lemiere, S. Slezack-Deschaumes, P. André, I. Mohamed, S. M. Yagi, and D. Laurain-Mattar 2020. “Evaluation of antiviral, antibacterial and antiproliferative activities of the endophytic fungus curvularia papendorfii, and isolation of a new polyhydroxyacid,” Microorganisms, 8/9 (2020), 1–20 (DOI: 10.3390/microorganisms8091353).

Kishimoto, T., N. Tomishige, M. Murate, R. Ishitsuka, H. Schaller, Y. Mély, K. Ueda, and T. Kobayashi 2020. “Cholesterol asymmetry at the tip of filopodia during cell adhesion,” FASEB Journal, 34/5 (2020), 6185–6197 (DOI: 10.1096/fj.201900065RR).

Klingler, J., H. Anton, E. Réal, M. Zeiger, C. Moog, Y. Mély, and E. Boutant 2020. “How HIV-1 gag manipulates its host cell proteins: A focus on interactors of the nucleocapsid domain,” Viruses, 12/8 (2020) (DOI: 10.3390/v12080888).

Kuchlyan, J., L. Martinez-Fernandez, M. Mori, K. Gavvala, S. Ciaco, C. Boudier, L. Richert, P. Didier, Y. Tor, R. Improta, and Y. Mély 2020. “What makes thienoguanosine an outstanding fluorescent DNA probe?” Journal of the American Chemical Society, 142/40 (2020), 16999–17014 (DOI: 10.1021/jacs.0c06165).

Lathe, R. and J. L. Darlix 2020. “Prion protein PrP nucleic acid binding and mobilization implicates retroelements as the replicative component of transmissible spongiform encephalopathy,” Archives of Virology, 165/3 (2020), 535–556 (DOI: 10.1007/s00705-020-04529-2).

Malancona, S., M. Mori, P. Fezzardi, M. Santoriello, A. Basta, M. Nibbio, L. Kovalenko, R. Speziale, M. R. Battista, A. Cellucci, N. Gennari, E. Monteagudo, A. Di Marco, A. Giannini, R. Sharma, M. Pires, E. Real, M. Zazzi, M. C. Dasso Lang, D. De Forni, F. Saladini, Y. Mely, V. Summa, S. Harper, and M. Botta 2020. “5,6-Dihydroxypyrimidine Scaffold to Target HIV-1 Nucleocapsid Protein,” ACS Medicinal Chemistry Letters, 11/5 (2020), 766–772 (DOI: 10.1021/acsmedchemlett.9b00608).

Manko, H., V. Normant, Q. Perraud, T. Steffan, V. Gasser, E. Boutant, É. Réal, I. J. Schalk, Y. Mély, and J. Godet 2020. “Flim-fret measurements of protein-protein interactions in live bacteria,” Journal of Visualized Experiments, 2020/162 (2020), 1–21 (DOI: 10.3791/61602).

Michel, B. Y., D. Dziuba, R. Benhida, A. P. Demchenko, and A. Burger 2020. “Probing of Nucleic Acid Structures, Dynamics, and Interactions With Environment-Sensitive Fluorescent Labels,” Frontiers in Chemistry, 8 (2020), 112 (DOI: 10.3389/fchem.2020.00112).

Mori, M., S. Ciaco, Y. Mély, and A. Karioti 2020. “Inhibitory Effect of Lithospermic Acid on the HIV-1 Nucleocapsid Protein,” Molecules (Basel, Switzerland), 25/22 (2020) (DOI: 10.3390/molecules25225434).

Murate, M., N. Tomishige, and T. Kobayashi 2020. “Wrapping axons in mammals and Drosophila: Different lipids, same principle,” Biochimie, 178 (2020), 39–48 (DOI: 10.1016/j.biochi.2020.08.002).

Osz, J., A. G. McEwen, M. Bourguet, F. Przybilla, C. Peluso-Iltis, P. Poussin-Courmontagne, Y. Mély, S. Cianférani, C. M. Jeffries, D. I. Svergun, and N. Rochel 2020. “Structural basis for DNA recognition and allosteric control of the retinoic acid receptors RAR–RXR,” Nucleic Acids Research, 48/17 (2020), 9969–9985 (DOI: 10.1093/nar/gkaa697).

Rocquigny, H. de, V. Rat, F. Pastor, J. L. Darlix, C. Hourioux, and P. Roingeard 2020. “Phosphorylation of the arginine-rich C-terminal domains of the hepatitis B virus (HBV) core protein as a fine regulator of the interaction between HBc and nucleic acid,” 12th (2020) (DOI: 10.3390/v12070738).

Schalk, I. J., C. Rigouin, and J. Godet 2020. “An overview of siderophore biosynthesis among fluorescent Pseudomonads and new insights into their complex cellular organization,” Environmental Microbiology, 22/4 (2020), 1447–1466 (DOI: 10.1111/1462-2920.14937).

Schubert, T., T. Sych, J. Madl, M. Xu, R. Omidvar, L. J. Patalag, A. Ries, K. Kettelhoit, A. Brandel, Y. Mely, C. Steinem, D. B. Werz, R. Thuenauer, and W. Römer 2020. “Differential recognition of lipid domains by two Gb3-binding lectins,” Scientific Reports, 10/1 (2020), 9752 (DOI: 10.1038/s41598-020-66522-8).

Sougnabé, A., D. Lissouck, F. Fontaine-Vive, M. Nsangou, Y. Mély, A. Burger, and C. A. Kenfack 2020. Electronic transitions and ESIPT kinetics of the thienyl-3-hydroxychromone nucleobase surrogate in DNA duplexes: A DFT/MD-TDDFT study, 10th, 13 (RSC Adv, 2020), 7349–7359 (DOI: 10.1039/c9ra10419d).

Suojalehto, H., K. Suuronen, P. Cullinan, I. Lindström, J. Sastre, J. Walusiak-Skorupa, X. Munoz, D. Talini, P. Klusackova, V. Moore, R. Merget, C. Svanes, P. Mason, M. Dell’Omo, G. Moscato, S. Quirce, J. Hoyle, D. Sherson, A. Preisser, M. Seed, C. Rifflart, J. Godet, F. de Blay, O. Vandenplas, Vandenplas, P. Hölttä, P. Kauppi, L. Hurdubaea, A. M. Preisser, V. Harth, P. Maestrelli, P. Pignatti, P. Paggiaro, I. Foletti, J. Kirkeleit, M. Wiszniewska, C. Romero-Mesones, M. Fernandez-Nieto, M. Sanchez-Jareno, J. Cannon, and S. Burge 2020. “Phenotyping Occupational Asthma Caused by Acrylates in a Multicenter Cohort Study,” Journal of Allergy and Clinical Immunology: In Practice, 8/3 (2020), 971–979.e1 (DOI: 10.1016/j.jaip.2019.10.017).


Akram, S., X. Wang, T. F. Vandamme, M. Collot, A. U. Rehman, N. Messaddeq, Y. Mély, and N. Anton 2019. “Toward the formulation of stable micro and nano double emulsions through a silica coating on internal water droplets,” Langmuir, 35/6 (2019), 2313–2325 (DOI: 10.1021/acs.langmuir.8b03919).

Bronner, C., M. Alhosin, A. Hamiche, and M. Mousli 2019. “Coordinated dialogue between UHRF1 and DNMT1 to ensure faithful inheritance of methylated DNA patterns,” Genes, 10/1 (2019), 65 (DOI: 10.3390/genes10010065).

Collot, M., P. Ashokkumar, H. Anton, E. Boutant, O. Faklaris, T. Galli, Y. Mély, L. Danglot, and A. S. Klymchenko 2019. “MemBright: A Family of Fluorescent Membrane Probes for Advanced Cellular Imaging and Neuroscience,” Cell Chemical Biology, 26/4 (2019), 600–614.e7 (DOI: 10.1016/j.chembiol.2019.01.009).

Collot, M., S. Bou, T. K. Fam, L. Richert, Y. Mély, L. Danglot, and A. S. Klymchenko 2019. “Probing Polarity and Heterogeneity of Lipid Droplets in Live Cells Using a Push-Pull Fluorophore,” Analytical Chemistry, 91/3 (2019), 1928–1935 (DOI: 10.1021/acs.analchem.8b04218).

Collot, M., E. Boutant, K. T. Fam, L. Danglot, and A. S. Klymchenko 2019. “Molecular tuning of styryl dyes leads to versatile and efficient plasma membrane probes for cell and tissue imaging,” bioRxiv, 31 (2019), 875–883 , (DOI: 10.1101/819383).

Collot, M., E. Boutant, M. Lehmann, and A. S. Klymchenko 2019. “BODIPY with Tuned Amphiphilicity as a Fluorogenic Plasma Membrane Probe,” Bioconjugate Chemistry, 30/1 (2019), 192–199 (DOI: 10.1021/acs.bioconjchem.8b00828).

Gasser, V., M. Malrieu, A. Forster, Y. Mély, I. J. Schalk, and J. Godet 2019. “In cellulo FRET-FLIM and single molecule tracking reveal the supra-molecular organization of the pyoverdine bio-synthetic enzymes in Pseudomonas aeruginosa,” Quarterly Reviews of Biophysics, 53, e1 (2019), e1 (DOI: 10.1017/S0033583519000155).

Godet, J. and Y. Mély 2019. “Exploring protein–protein interactions with large differences in protein expression levels using FLIM-FRET,” Methods and Applications in Fluorescence, 8/1 (2019), 014007 (DOI: 10.1088/2050-6120/ab5dd2).

Jiang, K., N. Humbert, S. Kk, T. Lequeu, Y. L. Lin, Y. Mely, and F. Westerlund 2019. “Annealing of ssDNA and compaction of dsDNA by the HIV-1 nucleocapsid and Gag proteins visualized using nanofluidic channels,” Quarterly reviews of biophysics, 52 (2019), e2 (DOI: 10.1017/S0033583518000124).

Mori, M., M. C. Dasso Lang, F. Saladini, N. Palombi, L. Kovalenko, D. De Forni, B. Poddesu, L. Friggeri, A. Giannini, S. Malancona, V. Summa, M. Zazzi, Y. Mely, and M. Botta 2019. “Synthesis and Evaluation of Bifunctional Aminothiazoles as Antiretrovirals Targeting the HIV-1 Nucleocapsid Protein,” ACS Medicinal Chemistry Letters, 10/4 (2019), 463–468 (DOI: 10.1021/acsmedchemlett.8b00506).

Nonat, A., S. Bahamyirou, A. Lecointre, F. Przybilla, Y. Mély, C. Platas-Iglesias, F. Camerel, O. Jeannin, and L. J. Charbonnière 2019. “Molecular Upconversion in Water in Heteropolynuclear Supramolecular Tb/Yb Assemblies,” Journal of the American Chemical Society, 141/4 (2019), 1568–1576 (DOI: 10.1021/jacs.8b10932).

Reix, N., M. Lodi, S. Jankowski, S. Molière, E. Luporsi, S. Leblanc, L. Scheer, I. Ibnouhsein, J. C. Benabu, V. Gabriele, A. Guggiola, J. M. Lessinger, M. P. Chenard, F. Alpy, J. P. Bellocq, K. Neuberger, C. Tomasetto, and C. Mathelin 2019. “A novel machine learning-derived decision tree including uPA/PAI-1 for breast cancer care,” Clinical Chemistry and Laboratory Medicine, 57/6 (2019), 901–910 (DOI: 10.1515/cclm-2018-1065).

Sych, T., T. Schubert, R. Vauchelles, J. Madl, R. Omidvar, R. Thuenauer, L. Richert, Y. Mély, and W. Römer 2019. “GUV-AP: Multifunctional Fiji-based tool for quantitative image analysis of Giant Unilamellar Vesicles,” Bioinformatics, 35/13 (2019), 2340–2342 (DOI: 10.1093/bioinformatics/bty962).

Toshima, K., M. Nagafuku, T. Okazaki, T. Kobayashi, and J. I. Inokuchi 2019. “Plasma membrane sphingomyelin modulates thymocyte development by inhibiting TCR-induced apoptosis,” International Immunology, 31/4 (2019), 211–223 (DOI: 10.1093/intimm/dxy082).

Vandenplas, O., J. Godet, L. Hurdubaea, C. Rifflart, H. Suojalehto, J. Walusiak-Skorupa, X. Munoz, J. Sastre, P. Klusackova, V. Moore, R. Merget, D. Talini, J. Kirkeleit, P. Mason, I. Folletti, P. Cullinan, G. Moscato, S. Quirce, J. Hoyle, D. Sherson, P. Kauppi, A. Preisser, N. Meyer, F. de Blay, P. Hölttä, A. M. Preisser, V. Harth, P. Maestrelli, P. Pignatti, P. Paggiaro, M. Dell’Omo, I. Foletti, C. Svanes, M. Wiszniewska, C. Romero-Mesones, M. Fernandez-Nieto, M. Sanchez-Jareno, J. Cannon, and S. Burge 2019. “Severe Occupational Asthma: Insights From a Multicenter European Cohort,” 7th (2019), 2309–2318.e4 (DOI: 10.1016/j.jaip.2019.03.017).

Vandenplas, O., J. Godet, L. Hurdubaea, C. Rifflart, H. Suojalehto, M. Wiszniewska, X. Munoz, J. Sastre, P. Klusackova, V. Moore, R. Merget, D. Talini, C. Svanes, P. Mason, M. Dell’Omo, P. Cullinan, G. Moscato, S. Quirce, J. Hoyle, D. L. Sherson, P. Kauppi, A. Preisser, N. Meyer, F. de Blay, H. Pirjo, P. Patrizia, P. Giann, B. Carolina, P. Pierluigi, F. Ilenia, K. Jorunn, W. S. Jolanta, R. M. Christian, F. N. Mar, and V. N. Gemma 2019. “Are high- and low-molecular-weight sensitizing agents associated with different clinical phenotypes of occupational asthma?” Allergy: European Journal of Allergy and Clinical Immunology, 74/2 (2019), 261–272 (DOI: 10.1111/all.13542).

Virot, E., J. Godet, N. Khayath, M. Ott, A. Dazy, and F. de Blay 2019. “Cluster analysis of indoor environmental factors associated with symptoms of mite allergy,” Annals of Allergy, Asthma and Immunology, 123/3 (2019), 280–283 (DOI: 10.1016/j.anai.2019.05.020).

Zgheib, S., I. Lysova, E. Réal, O. Dukhno, R. Vauchelles, M. Pires, H. Anton, and Y. Mély 2019. “Quantitative monitoring of the cytoplasmic release of NCp7 proteins from individual HIV-1 viral cores during the early steps of infection,” Scientific Reports, 9/1 (2019), 945 (DOI: 10.1038/s41598-018-37150-0).


Bouchaala, R., L. Richert, N. Anton, T. F. Vandamme, S. Djabi, Y. Mély, and A. S. Klymchenko 2018. “Quantifying Release from Lipid Nanocarriers by Fluorescence Correlation Spectroscopy,” ACS Omega, 3/10 (2018), 14333–14340 (DOI: 10.1021/acsomega.8b01488).

Chavent, M., A. L. Duncan, P. Rassam, O. Birkholz, J. Hélie, T. Reddy, D. Beliaev, B. Hambly, J. Piehler, C. Kleanthous, and M. S. P. Sansom 2018. “How nanoscale protein interactions determine the mesoscale dynamic organisation of bacterial outer membrane proteins,” Nature Communications, 9/1 (2018), 2846 (DOI: 10.1038/s41467-018-05255-9).

Chen, W., L. N. Zebaze, J. Dong, L. Chézeau, P. Inquimbert, S. Hugel, S. Niu, F. Bihel, E. Boutant, E. Réal, P. Villa, M. P. Junier, H. Chneiweiss, M. Hibert, J. Haiech, M. C. Kilhoffer, and M. Zeniou 2018. “WNK1 kinase and its partners Akt, SGK1 and NBC-family Na+/HCO3- cotransporters are potential therapeutic targets for glioblastoma stem-like cells linked to Bisacodyl signaling,” Oncotarget, 9/43 (2018), 27197–27219 (DOI: 10.18632/oncotarget.25509).

Choudhry, H., M. A. Zamzami, Z. Omran, W. Wu, M. Mousli, C. Bronner, and M. Alhosin 2018. “Targeting microRNA/UHRF1 pathways as a novel strategy for cancer therapy,” Oncology Letters, 15/1 (2018), 3–10 (DOI: 10.3892/ol.2017.7290).

Deprez, L., B. Toussaint, I. Zegers, H. Schimmel, D. Grote-Koska, R. Klauke, F. J. Gella, M. Orth, J. M. Lessinger, T. Trenti, G. Nilsson, and F. Ceriotti 2018. “Commutability assessment of candidate reference materials for pancreatic alpha-amylase,” Clinical Chemistry, 64/8 (2018), 1193–1202 (DOI: 10.1373/clinchem.2018.289744).

Dukhno, O., F. Przybilla, V. Muhr, M. Buchner, T. Hirsch, and Y. Mély 2018. Time-dependent luminescence loss for individual upconversion nanoparticles upon dilution in aqueous solution, 10th, 34 (2018), 15904–15910 (DOI: 10.1039/c8nr03892a).

El Meshri, S. E., E. Boutant, A. Mouhand, A. Thomas, V. Larue, L. Richert, V. Vivet-Boudou, Y. Mély, C. Tisné, D. Muriaux, and H. de Rocquigny 2018. “The NC domain of HIV-1 Gag contributes to the interaction of Gag with TSG101,” Biochimica et Biophysica Acta - General Subjects, 1862/6 (2018), 1421–1431 (DOI: 10.1016/j.bbagen.2018.03.020).

Gamba, E., M. Mori, L. Kovalenko, A. Giannini, A. Sosic, F. Saladini, D. Fabris, Y. Mély, B. Gatto, and M. Botta 2018. “Identification of novel 2-benzoxazolinone derivatives with specific inhibitory activity against the HIV-1 nucleocapsid protein,” European Journal of Medicinal Chemistry, 145 (2018), 154–164 (DOI: 10.1016/j.ejmech.2017.12.073).

García-Iriepa, C., P. Gosset, R. Berraud-Pache, M. Zemmouche, G. Taupier, K. D. Dorkenoo, P. Didier, J. Léonard, N. Ferré, and I. Navizet 2018. “Simulation and Analysis of the Spectroscopic Properties of Oxyluciferin and Its Analogues in Water,” Journal of Chemical Theory and Computation, 14/4 (2018), 2117–2126 (DOI: 10.1021/acs.jctc.7b01240).

Glushonkov, O., E. Réal, E. Boutant, Y. Mély, and P. Didier 2018. “Optimized protocol for combined PALM-dSTORM imaging,” Scientific Reports, 8/1 (2018), 8749 (DOI: 10.1038/s41598-018-27059-z).

Housden, N. G., P. Rassam, S. Lee, F. Samsudin, R. Kaminska, C. Sharp, J. D. Goult, M. L. Francis, S. Khalid, H. Bayley, and C. Kleanthous 2018. “Directional Porin Binding of Intrinsically Disordered Protein Sequences Promotes Colicin Epitope Display in the Bacterial Periplasm,” 57th (2018), 4374–4381 (DOI: 10.1021/acs.biochem.8b00621).

Hullin-Matsuda, F., M. Murate, and T. Kobayashi 2018. “Protein probes to visualize sphingomyelin and ceramide phosphoethanolamine,” Chemistry and Physics of Lipids, 216 (2018), 132–141 (DOI: 10.1016/j.chemphyslip.2018.09.002).

Ibrahim, A., M. Alhosin, C. Papin, K. Ouararhni, Z. Omran, M. A. Zamzami, A. L. Al-Malki, H. Choudhry, Y. Mély, A. Hamiche, M. Mousli, and C. Bronner 2018. “Thymoquinone challenges UHRF1 to commit auto-ubiquitination: A key event for apoptosis induction in cancer cells,” Oncotarget, 9/47 (2018), 28599–28611 (DOI: 10.18632/oncotarget.25583).

Kobayashi, T. and A. K. Menon 2018. “Transbilayer lipid asymmetry,” Current Biology, 28/8 (2018), R386–R391 (DOI: 10.1016/j.cub.2018.01.007).

Lysova, I., C. Spiegelhalter, E. Réal, S. Zgheib, H. Anton, and Y. Mély 2018. “ReAsH/tetracystein-based correlative light-electron microscopy for HIV-1 imaging during the early stages of infection,” Methods and Applications in Fluorescence, 6/4 (2018), 2018–2 21 (DOI: 10.1088/2050-6120/aacec1).

Malabirade, A., J. Habier, A. Heintz-Buschart, P. May, J. Godet, R. Halder, A. Etheridge, D. Galas, P. Wilmes, and J. V. Fritz 2018. “The RNA complement of outer membrane vesicles from Salmonella enterica Serovar Typhimurium under distinct culture conditions,” Frontiers in Microbiology, 9/AUG (2018), —–4 56 — (DOI: 10.3389/fmicb.2018.02015).

Mori, M., L. Kovalenko, S. Malancona, F. Saladini, D. De Forni, M. Pires, N. Humbert, E. Real, T. Botzanowski, S. Cianférani, A. Giannini, M. C. Dasso Lang, G. Cugia, B. Poddesu, F. Lori, M. Zazzi, S. Harper, V. Summa, Y. Mely, and M. Botta 2018. “Structure-Based Identification of HIV-1 Nucleocapsid Protein Inhibitors Active against Wild-Type and Drug-Resistant HIV-1 Strains,” ACS Chemical Biology, 13/1 (2018), 253–266 (DOI: 10.1021/acschembio.7b00907).

Perraud, Q., L. Moynié, V. Gasser, M. Munier, J. Godet, F. Hoegy, Y. Mély, G. L. A. Mislin, J. H. Naismith, and I. J. Schalk 2018. “A Key Role for the Periplasmic PfeE Esterase in Iron Acquisition via the Siderophore Enterobactin in Pseudomonas aeruginosa,” ACS Chemical Biology, 13/9 (2018), 2603–2614 (DOI: 10.1021/acschembio.8b00543).

Pham, V. V., C. Salguero, S. N. Khan, J. L. Meagher, W. C. Brown, N. Humbert, H. de Rocquigny, J. L. Smith, and V. M. D’Souza 2018. “HIV-1 Tat interactions with cellular 7SK and viral TAR RNAs identifies dual structural mimicry,” Nature Communications, 9/1 (2018), 4266 (DOI: 10.1038/s41467-018-06591-6).

Rassam, P., K. R. Long, R. Kaminska, D. J. Williams, G. Papadakos, C. G. Baumann, and C. Kleanthous 2018. “Intermembrane crosstalk drives inner-membrane protein organization in Escherichia coli,” Nature Communications, 9/1 (2018), 1082 (DOI: 10.1038/s41467-018-03521-4).

Rehman, A. U., Z. Omran, H. Anton, Y. Mély, S. Akram, T. F. Vandamme, and N. Anton 2018. “Development of doxorubicin hydrochloride loaded pH-sensitive liposomes: Investigation on the impact of chemical nature of lipids and liposome composition on pH-sensitivity,” European Journal of Pharmaceutics and Biopharmaceutics, 133 (2018), 331–338 (DOI: 10.1016/j.ejpb.2018.11.001).

Reisch, A., D. Heimburger, P. Ernst, A. Runser, P. Didier, D. Dujardin, and A. S. Klymchenko 2018. “Protein-Sized Dye-Loaded Polymer Nanoparticles for Free Particle Diffusion in Cytosol,” Advanced Functional Materials, 28/48 (2018), 1805157 (DOI: 10.1002/adfm.201805157).

Sholokh, M., R. Sharma, N. Grytsyk, L. Zaghzi, V. Y. Postupalenko, D. Dziuba, N. P. F. Barthes, B. Y. Michel, C. Boudier, O. A. Zaporozhets, Y. Tor, A. Burger, and Y. Mély 2018. “Environmentally Sensitive Fluorescent Nucleoside Analogues for Surveying Dynamic Interconversions of Nucleic Acid Structures,” Chemistry - A European Journal, 24/52 (2018), 13850–13861 (DOI: 10.1002/chem.201802297).

Shvadchak, V., S. Zgheib, B. Basta, N. Humbert, J. Langedijk, M. C. Morris, S. Ciaco, O. Maskri, J. L. Darlix, O. Mauffret, P. Fossé, E. Réal, and Y. Mély 2018. “Rationally Designed Peptides as Efficient Inhibitors of Nucleic Acid Chaperone Activity of HIV-1 Nucleocapsid Protein,” Biochemistry, 57/30 (2018), 4562–4573 (DOI: 10.1021/acs.biochem.8b00527).

Skilitsi, A. I., D. Agathangelou, I. Shulov, J. Conyard, S. Haacke, Y. Mély, A. Klymchenko, and J. Léonard 2018. “Ultrafast photophysics of the environment-sensitive 4′-methoxy-3-hydroxyflavone fluorescent dye,” Physical Chemistry Chemical Physics, 20/11 (2018), 7885–7895 (DOI: 10.1039/c7cp08584b).

Sych, T., Y. Mély, and W. Römer 2018. “Lipid self-assembly and lectin-induced reorganization of the plasma membrane,” Philosophical Transactions of the Royal Society B: Biological Sciences, 373/1747 (2018), 20170117 (DOI: 10.1098/rstb.2017.0117).

Villringer, S., J. Madl, T. Sych, C. Manner, A. Imberty, and W. Römer 2018. “Lectin-mediated protocell crosslinking to mimic cell-cell junctions and adhesion,” Scientific Reports, 8/1 (2018), 1932 (DOI: 10.1038/s41598-018-20230-6).

Wallyn, J., N. Anton, C. A. Serra, M. Bouquey, M. Collot, H. Anton, J.-L. Weickert, N. Messaddeq, and T. F. Vandamme 2018. “A new formulation of poly(MAOTIB) nanoparticles as an efficient contrast agent for in vivo X-ray imaging,” Acta Biomaterialia, 66 (2018), 200–212 (DOI: 10.1016/j.actbio.2017.11.011).

Yilmaz, N., A. Yamaji-Hasegawa, F. Hullin-Matsuda, and T. Kobayashi 2018. “Molecular mechanisms of action of sphingomyelin-specific pore-forming toxin, lysenin,” Seminars in Cell and Developmental Biology, 73 (2018), 188–198 (DOI: 10.1016/j.semcdb.2017.07.036).


Abe, M. and T. Kobayashi 2017. “Dynamics of sphingomyelin- and cholesterol-enriched lipid domains during cytokinesis,” Methods in Cell Biology, 137 (2017), 15–24 (DOI: 10.1016/bs.mcb.2016.03.030).

Ashraf, W., C. Bronner, L. Zaayter, T. Ahmad, L. Richert, M. Alhosin, A. Ibrahim, A. Hamiche, Y. Mely, and M. Mousli 2017. “Interaction of the epigenetic integrator UHRF1 with the MYST domain of TIP60 inside the cell,” Journal of Experimental and Clinical Cancer Research, 36/1 (2017), 188 (DOI: 10.1186/s13046-017-0659-1).

Ashraf, W., A. Ibrahim, M. Alhosin, L. Zaayter, K. Ouararhni, C. Papin, T. Ahmad, A. Hamiche, Y. Mély, C. Bronner, and M. Mousli 2017. “The epigenetic integrator UHRF1: On the road to become a universal biomarker for cancer,” Oncotarget, 8/31 (2017), 51946–51962 (DOI: 10.18632/oncotarget.17393).

Bel, S., C. Billard, J. Godet, V. Viviani, C. Akladios, A. Host, E. Faller, T. Boisrame, M. Hummel, J. J. Baldauf, L. Lecointre, and O. Garbin 2017. “Risk of malignancy on suspicion of polyps in menopausal women,” European Journal of Obstetrics and Gynecology and Reproductive Biology, 216 (2017), 138–142 (DOI: 10.1016/j.ejogrb.2017.07.013).

Bouchaala, R., N. Anton, H. Anton, T. Vandamme, J. Vermot, D. Smail, Y. Mély, and A. S. Klymchenko 2017. “Light-triggered release from dye-loaded fluorescent lipid nanocarriers in vitro and in vivo,” Colloids and Surfaces B: Biointerfaces, 156 (2017), 414–421 (DOI: 10.1016/j.colsurfb.2017.05.035).

Bronner, C., M. Mousli, A. Burger, and Y. Mély 2017. “La première étape de la transmission d’un caractère épigénétique suivie par fluorescence,” Medecine/Sciences, 33/8-9 (2017), 717–719 (DOI: 10.1051/medsci/20173308010).

Cordeanu, E. M., S. Gaertner, A. Faller, C. Mirea, J. M. Lessinger, V. Kemmel, and D. Stephan 2017. “Rifampicin reverses nicardipine effect inducing uncontrolled essential hypertension,” Fundamental and Clinical Pharmacology, 31/5 (2017), 587–589 (DOI: 10.1111/fcp.12292).

Ding, S., N. Anton, S. Akram, M. Er-Rafik, H. Anton, A. Klymchenko, W. Yu, T. F. Vandamme, and C. A. Serra 2017. “A new method for the formulation of double nanoemulsions,” Soft Matter, 13/8 (2017), 1660–1669 (DOI: 10.1039/c6sm02603f).

Dong, J., F. J. Aulestia, S. Assad Kahn, M. Zeniou, L. G. Dubois, E. A. El-Habr, F. Daubeuf, N. Tounsi, S. H. Cheshier, N. Frossard, M. P. Junier, H. Chneiweiss, I. Néant, M. Moreau, C. Leclerc, J. Haiech, and M. C. Kilhoffer 2017. “Bisacodyl and its cytotoxic activity on human glioblastoma stem-like cells. Implication of inositol 1,4,5-triphosphate receptor dependent calcium signaling,” Biochimica et Biophysica Acta - Molecular Cell Research, 1864/6 (2017), 1018–1027 (DOI: 10.1016/j.bbamcr.2017.01.010).

Dukhno, O., F. Przybilla, M. Collot, A. Klymchenko, V. Pivovarenko, M. Buchner, V. Muhr, T. Hirsch, and Y. Mély 2017. “Quantitative assessment of energy transfer in upconverting nanoparticles grafted with organic dyes,” Nanoscale, 9/33 (2017), 11994–12004 (DOI: 10.1039/c6nr09706e).

Frath, D., P. Didier, Y. Mély, J. Massue, and G. Ulrich 2017. “Vectorization and Intracellular Distribution of a Two-Photon-Absorbing, Near-Infrared-Emitting ππ-Extended Boranil Dye,” ChemPhotoChem, 1/4 (2017), 109–112 (DOI: 10.1002/cptc.201700012).

Ghose, A., O. V. Maltsev, N. Humbert, L. Hintermann, Y. Arntz, P. Naumov, Y. Mély, and P. Didier 2017. “Oxyluciferin Derivatives: A Toolbox of Environment-Sensitive Fluorescence Probes for Molecular and Cellular Applications,” Journal of Physical Chemistry B, 121/7 (2017), 1566–1575 (DOI: 10.1021/acs.jpcb.6b12616).

Kilin, V., K. Gavvala, N. P. F. Barthes, B. Y. Michel, D. Shin, C. Boudier, O. Mauffret, V. Yashchuk, M. Mousli, M. Ruff, F. Granger, S. Eiler, C. Bronner, Y. Tor, A. Burger, and Y. Mély 2017. “Dynamics of Methylated Cytosine Flipping by UHRF1,” Journal of the American Chemical Society, 139/6 (2017), 2520–2528 (DOI: 10.1021/jacs.7b00154).

Kinoshita, M., K. G. N. Suzuki, N. Matsumori, M. Takada, H. Ano, K. Morigaki, M. Abe, A. Makino, T. Kobayashi, K. M. Hirosawa, T. K. Fujiwara, A. Kusumi, and M. Murata 2017. “Raft-based sphingomyelin interactions revealed by new fluorescent sphingomyelin analogs,” Journal of Cell Biology, 216/4 (2017), 1183–1204 (DOI: 10.1083/jcb.201607086).

Lathe, R. and J.-L. Darlix 2017. “Prion Protein PRNP: A New Player in Innate Immunity? The A-beta Connection,” Journal of Alzheimer’s Disease Reports, 1/1 (2017), 263–275 (DOI: 10.3233/adr-170037).

Lenarčič, T., I. Albert, H. Böhm, V. Hodnik, K. Pirc, A. B. Zavec, M. Podobnik, D. Pahovnik, E. Žagar, R. Pruitt, P. Greimel, A. Yamaji-Hasegawa, T. Kobayashi, A. Zienkiewicz, J. Gömann, J. C. Mortimer, L. Fang, A. Mamode-Cassim, M. Deleu, L. Lins, C. Oecking, I. Feussner, S. Mongrand, G. Anderluh, and T. Nürnberger 2017. “Eudicot plant-specific sphingolipids determine host selectivity of microbial NLP cytolysins,” Science, 358/6369 (2017), 1431–1434 (DOI: 10.1126/science.aan6874).

Makino, A., M. Abe, E. Ishitsuka, M. Murate, T. Kishimoto, S. Sakai, F. Hullin-Matsuda, Y. Shimada, A. Inaba, I. Miyatake, H. Tanaka, A. Kurahashi, C. G. Pack, R. S. Kasai, S. Kubo, N. L. Schieber, N. Dohmae, N. Tochio, K. Hagiwara, Y. Sasaki, Y. Aida, F. Fujimori, T. Kigawa, K. Nishibori, R. G. Parton, A. Kusumi, Y. Sako, G. Anderluh, M. Yamashita, T. Kobayashi, P. Greimel, and O. Kobayashi 2017. “A novel sphingomyelin/cholesterol domain-specific probe reveals the dynamics of the membrane domains during virus release and in Niemann-Pick type C,” FASEB Journal, 31/4 (2017), 1301–1322 (DOI: 10.1096/fj.201500075R).

Matsunaga, S., H. Shimizu, T. Yamada, T. Kobayashi, and M. Kawai 2017. “In Situ STM and Vibrational Study of Nanometer-Scale Reorganization of a Phospholipid Monolayer Accompanied by Potential-Driven Headgroup Digestion,” Langmuir, 33/46 (2017), 13157–13167 (DOI: 10.1021/acs.langmuir.7b01912).

Ode, T., K. A. Podyma-Inoue, K. Terasawa, J. ichi Inokuchi, T. Kobayashi, T. Watabe, Y. Izumi, and M. Hara-Yokoyama 2017. “PDMP, a ceramide analogue, acts as an inhibitor of mTORC1 by inducing its translocation from lysosome to endoplasmic reticulum,” Experimental Cell Research, 350/1 (2017), 103–114 (DOI: 10.1016/j.yexcr.2016.11.011).

Pivovarenko, V. G., O. Bugera, N. Humbert, A. S. Klymchenko, and Y. Mély 2017. “A Toolbox of Chromones and Quinolones for Measuring a Wide Range of ATP Concentrations,” Chemistry - A European Journal, 23/49 (2017), 11927–11934 (DOI: 10.1002/chem.201702484).

Platet, N., I. Hinkel, L. Richert, D. Murdamoothoo, A. Moufok-Sadoun, M. Vanier, P. Lavalle, C. Gaiddon, D. Vautier, J. N. Freund, and I. Gross 2017. “The tumor suppressor CDX2 opposes pro-metastatic biomechanical modifications of colon cancer cells through organization of the actin cytoskeleton,” Cancer Letters, 386 (2017), 57–64 (DOI: 10.1016/j.canlet.2016.10.040).

Pyrshev, K. A., S. O. Yesylevskyy, Y. Mély, A. P. Demchenko, and A. S. Klymchenko 2017. “Caspase-3 activation decreases lipid order in the outer plasma membrane leaflet during apoptosis: A fluorescent probe study,” Biochimica et Biophysica Acta - Biomembranes, 1859/10 (2017), 2123–2132 (DOI: 10.1016/j.bbamem.2017.08.002).

Shaya, J., M. Collot, F. Bénailly, N. Mahmoud, Y. Mély, B. Y. Michel, A. S. Klymchenko, and A. Burger 2017. “Turn-on Fluorene Push-Pull Probes with High Brightness and Photostability for Visualizing Lipid Order in Biomembranes,” ACS Chemical Biology, 12/12 (2017), 3022–3030 (DOI: 10.1021/acschembio.7b00658).

Sumi, M., A. Makino, T. Inaba, Y. Sako, F. Fujimori, P. Greimel, and T. Kobayashi 2017. “Photoswitchable phospholipid FRET acceptor: Detergent free intermembrane transfer assay of fluorescent lipid analogs,” Scientific Reports, 7/1 (2017), 2900 (DOI: 10.1038/s41598-017-02980-x).

Trofymchuk, K., A. Reisch, P. Didier, F. Fras, P. Gilliot, Y. Mely, and A. S. Klymchenko 2017a. “Giant light-harvesting nanoantenna for single-molecule detection in ambient light,” Nature Photonics, 11/10 (2017), 657–663 (DOI: 10.1038/s41566-017-0001-7).

Vosnakis, N., M. Koch, E. Scheer, P. Kessler, Y. Mély, P. Didier, and L. Tora 2017. “Coactivators and general transcription factors have two distinct dynamic populations dependent on transcription,” The EMBO Journal, 36/18 (2017), 2710–2725 (DOI: 10.15252/embj.201696035).

White, P., A. Joshi, P. Rassam, N. G. Housden, R. Kaminska, J. D. Goult, C. Redfield, L. C. McCaughey, D. Walker, S. Mohammed, and C. Kleanthous 2017. “Exploitation of an iron transporter for bacterial protein antibiotic import,” Proceedings of the National Academy of Sciences of the United States of America, 114/45 (2017), 12051–12056 (DOI: 10.1073/pnas.1713741114).

Wilhelm, L. P., C. Wendling, B. Védie, T. Kobayashi, M. Chenard, C. Tomasetto, G. Drin, and F. Alpy 2017. “ STARD 3 mediates endoplasmic reticulum‐to‐endosome cholesterol transport at membrane contact sites,” The EMBO Journal, 36/10 (2017), 1412–1433 (DOI: 10.15252/embj.201695917).

Zargarian, L., A. B. Imeddourene, K. Gavvala, N. P. F. Barthes, B. Y. Michel, C. A. Kenfack, N. Morellet, B. René, P. Fossé, A. Burger, Y. Mély, and O. Mauffret 2017. “Structural and Dynamical Impact of a Universal Fluorescent Nucleoside Analogue Inserted into a DNA Duplex,” Journal of Physical Chemistry B, 121/50 (2017), 11249–11261 (DOI: 10.1021/acs.jpcb.7b08825).


Alhosin, M., Z. Omran, M. A. Zamzami, A. L. Al-Malki, H. Choudhry, M. Mousli, and C. Bronner 2016. “Signalling pathways in UHRF1-dependent regulation of tumor suppressor genes in cancer,” Journal of Experimental & Clinical Cancer Research, 35/1 (2016), 174 (DOI: 10.1186/s13046-016-0453-5).

Ateba, B. A., D. Lissouck, A. Azébazé, C. T. Ebelle, A. Nassi, E. Ngameni, G. Duportail, L. Mbazé, and C. A. Kenfack 2016. “Characterization of Mammea A/AA in solution and in interaction with Beta-cyclodextrin: UV-visible spectroscopy, cyclic voltammetry and DFT-TDDFT/MD study,” Journal of Molecular Liquids, 213 (2016), 294–303 (DOI: 10.1016/j.molliq.2015.11.006).

Barthes, N. P. F., K. Gavvala, D. Bonhomme, A. S. Dabert-Gay, D. Debayle, Y. Mély, B. Y. Michel, and A. Burger 2016. “Design and Development of a Two-Color Emissive FRET Pair Based on a Photostable Fluorescent Deoxyuridine Donor Presenting a Mega-Stokes Shift,” Journal of Organic Chemistry, 81/22 (2016), 10733–10741 (DOI: 10.1021/acs.joc.6b01807).

Barthes, N. P. F., K. Gavvala, D. Dziuba, D. Bonhomme, I. A. Karpenko, A. S. Dabert-Gay, D. Debayle, A. P. Demchenko, R. Benhida, B. Y. Michel, Y. Mély, and A. Burger 2016. “Dual emissive analogue of deoxyuridine as a sensitive hydration-reporting probe for discriminating mismatched from matched DNA and DNA/DNA from DNA/RNA duplexes,” Journal of Materials Chemistry C, 4/14 (2016), 3010–3017 (DOI: 10.1039/c5tc03427b).

Belfetmi, A., L. Zargarian, C. Tisné, D. Sleiman, N. Morellet, E. Lescop, O. Maskri, B. René, Y. Mély, P. Fossé, and O. Mauffret 2016. “Insights into the mechanisms of RNA secondary structure destabilization by the HIV-1 nucleocapsid protein,” Rna, 22/4 (2016), 506–517 (DOI: 10.1261/rna.054445.115).

Bongiovanni, M. N., J. Godet, M. H. Horrocks, L. Tosatto, A. R. Carr, D. C. Wirthensohn, R. T. Ranasinghe, J. E. Lee, A. Ponjavic, J. V. Fritz, C. M. Dobson, D. Klenerman, and S. F. Lee 2016. “Multi-dimensional super-resolution imaging enables surface hydrophobicity mapping,” Nature Communications, 7 (2016), 13544 (DOI: 10.1038/ncomms13544).

Bouchaala, R., L. Mercier, B. Andreiuk, Y. Mély, T. Vandamme, N. Anton, J. G. Goetz, and A. S. Klymchenko 2016. “Integrity of lipid nanocarriers in bloodstream and tumor quantified by near-infrared ratiometric FRET imaging in living mice,” Journal of Controlled Release, 236 (2016), 57–67 (DOI: 10.1016/j.jconrel.2016.06.027).

Chen, Y., O. Maskri, F. Chaminade, B. René, J. Benkaroun, J. Godet, Y. Mély, O. Mauffret, and P. Fossé 2016. “Structural insights into the HIV-1 minus-strand strong-stop DNA,” Journal of Biological Chemistry, 291/7 (2016), 3468–3482 (DOI: 10.1074/jbc.M115.708099).

Cherchi, L., J. F. Ciornohac, J. Godet, P. Clavert, and J. F. Kempf 2016. “Critical shoulder angle: Measurement reproducibility and correlation with rotator cuff tendon tears,” Orthopaedics and Traumatology: Surgery and Research, 102/5 (2016), 559–562 (DOI: 10.1016/j.otsr.2016.03.017).

Darlix, J. L., H. De Rocquigny, and Y. Mély 2016. “The multiple roles of the nucleocapsid in retroviral RNA conversion into proviral DNA by reverse transcriptase,” Biochemical Society Transactions, 44/5 (2016), 1427–1440 (DOI: 10.1042/BST20160101-T).

Desplancq, D., G. Freund, S. Conic, A. P. Sibler, P. Didier, A. Stoessel, M. Oulad-Abdelghani, M. Vigneron, J. Wagner, Y. Mély, B. Chatton, L. Tora, and E. Weiss 2016. “Targeting the replisome with transduced monoclonal antibodies triggers lethal DNA replication stress in cancer cells,” Experimental Cell Research, 342/2 (2016), 145–158 (DOI: 10.1016/j.yexcr.2016.03.003).

El Asmar, Z., J. Terrand, M. Jenty, L. Host, M. Mlih, A. Zerr, H. Justiniano, R. L. Matz, C. Boudier, E. Scholler, J. M. Garnier, D. Bertaccini, D. Thiersé, C. Schaeffer, A. Van Dorsselaer, J. Herz, V. Bruban, and P. Boucher 2016. “Convergent signaling pathways controlled by LRP1 (Receptor-related Protein 1) cytoplasmic and extracellular domains limit cellular cholesterol accumulation,” Journal of Biological Chemistry, 291/10 (2016), 5116–5127 (DOI: 10.1074/jbc.M116.714485).

Elgaher, W. A. M., K. K. Sharma, J. Haupenthal, F. Saladini, M. Pires, E. Real, Y. Mély, and R. W. Hartmann 2016. “Discovery and Structure-Based Optimization of 2-Ureidothiophene-3-carboxylic Acids as Dual Bacterial RNA Polymerase and Viral Reverse Transcriptase Inhibitors,” Journal of Medicinal Chemistry, 59/15 (2016), 7212–7222 (DOI: 10.1021/acs.jmedchem.6b00730).

El Mekdad, H., E. Boutant, H. Karnib, M. E. Biedma, K. K. Sharma, I. Malytska, G. Laumond, M. Roy, E. Réal, J. C. Paillart, C. Moog, J. L. Darlix, Y. Mély, and H. de Rocquigny 2016. “Characterization of the interaction between the HIV-1 Gag structural polyprotein and the cellular ribosomal protein L7 and its implication in viral nucleic acid remodeling,” Retrovirology, 13/1 (2016), 2016–3 48 (DOI: 10.1186/s12977-016-0287-4).

Gavvala, K., N. P. F. Barthes, D. Bonhomme, A. S. Dabert-Gay, D. Debayle, B. Y. Michel, A. Burger, and Y. Mély 2016. “A turn-on dual emissive nucleobase sensitive to mismatches and duplex conformational changes,” RSC Advances, 6/90 (2016), 87142–87146 (DOI: 10.1039/c6ra19061h).

Hullin-Matsuda, F., A. Makino, M. Murate, and T. Kobayashi 2016. “Probing phosphoethanolamine-containing lipids in membranes with duramycin/cinnamycin and aegerolysin proteins,” Biochimie, 130 (2016), 81–90 (DOI: 10.1016/j.biochi.2016.09.020).

Inaba, T., T. Kishimoto, M. Murate, T. Tajima, S. Sakai, M. Abe, A. Makino, N. Tomishige, R. Ishitsuka, Y. Ikeda, S. Takeoka, and T. Kobayashi 2016. “Phospholipase C beta1 induces membrane tubulation and is involved in caveolae formation,” Proceedings of the National Academy of Sciences of the United States of America, 113/28 (2016), 7834–7839 (DOI: 10.1073/pnas.1603513113).

Jenny, J. Y., B. Adamczewski, E. De Thomasson, J. Godet, H. Bonfait, and C. Delaunay 2016. “Can the presence of an infection be predicted before a revision total hip arthroplasty? Preliminary study to establish an infection score,” Orthopaedics and Traumatology: Surgery and Research, 102/2 (2016), 161–165 (DOI: 10.1016/j.otsr.2015.12.017).

Koschut, D., L. Richert, G. Pace, H. H. Niemann, Y. Mély, and V. Orian-Rousseau 2016. “Live cell imaging shows hepatocyte growth factor-induced Met dimerization,” Biochimica et Biophysica Acta - Molecular Cell Research, 1863/7 (2016), 1552–1558 (DOI: 10.1016/j.bbamcr.2016.04.015).

Krifa, M., S. E. El Meshri, N. Bentouati, A. Pizzi, E. Sick, L. Chekir-Ghedira, and P. Rondé 2016. “In Vitro and in Vivo Anti-Melanoma Effects of Pituranthos tortuosus Essential Oil Via Inhibition of FAK and Src Activities,” Journal of Cellular Biochemistry, 117/5 (2016), 1167–1175 (DOI: 10.1002/jcb.25400).

Krummel, T., E. Prinz, M. A. Metten, C. Borni-Duval, D. Bazin-Kara, E. Charlin, J. M. Lessinger, and T. Hannedouche 2016. “Prognosis of patients with severe hyponatraemia is related not only to hyponatraemia but also to comorbidities and to medical management: Results of an observational retrospective study,” BMC Nephrology, 17/1 (2016), 159–170 , (DOI: 10.1186/s12882-016-0370-z).

Lysova, I., H. Anton, I. Dmitruk, and Y. Mely 2016. “Tuning luminescent properties of CdSe nanoclusters by phosphine surface passivation,” Methods and Applications in Fluorescence, 4/4 (2016), 044009 (DOI: 10.1088/2050-6120/4/4/044009).

Makino, A., F. Hullin-Matsuda, M. Murate, M. Abe, N. Tomishigec, M. Fukuda, S. Yamashita, T. Fujimoto, H. Vidal, M. Lagarde, I. Delton, and T. Kobayashi 2016. “Acute accumulation of free cholesterol induces the degradation of perilipin 2 and Rab18-dependent fusion of ER and lipid droplets in cultured human hepatocytes,” Molecular Biology of the Cell, 27/21 (2016), 3293–3304 (DOI: 10.1091/mbc.E15-10-0730).

Margathe, J. F., X. Iturrioz, P. Regenass, I. A. Karpenko, N. Humbert, H. De Rocquigny, M. Hibert, C. Llorens-Cortes, and D. Bonnet 2016. “Convenient access to fluorescent probes by chemoselective acylation of hydrazinopeptides: Application to the synthesis of the first far-red ligand for apelin receptor imaging,” Chemistry - A European Journal, 22/4 (2016), 1399–1405 (DOI: 10.1002/chem.201503630).

Niko, Y., P. Didier, Y. Mely, G. I. Konishi, and A. S. Klymchenko 2016. “Bright and photostable push-pull pyrene dye visualizes lipid order variation between plasma and intracellular membranes,” Scientific Reports, 6 (2016), 2016–4 61–– (DOI: 10.1038/srep18870).

Petrizza, L., M. Collot, L. Richert, Y. Mely, L. Prodi, and A. S. Klymchenko 2016. “Dye-doped silica nanoparticle probes for fluorescence lifetime imaging of reductive environments in living cells,” RSC Advances, 6/106 (2016), 104164–104172 (DOI: 10.1039/c6ra21427d).

Pierrat, P., A. Casset, P. Didier, D. Kereselidze, M. Lux, F. Pons, and L. Lebeau 2016. “Cationic DOPC-Detergent Conjugates for Safe and Efficient in Vitro and in Vivo Nucleic Acid Delivery,” ChemBioChem, 17/18 (2016), 1771–1783 (DOI: 10.1002/cbic.201600302).

Racine, P. J., C. Chamontin, H. De Rocquigny, S. Bernacchi, J. C. Paillart, and M. Mougel 2016. “Requirements for nucleocapsid-mediated regulation of reverse transcription during the late steps of HIV-1 assembly,” Scientific Reports, 6 (2016), 27536 (DOI: 10.1038/srep27536).

Richert, L., N. Humbert, E. Larquet, Y. Girerd-Chambaz, C. Manin, F. Ronzon, and Y. Mély 2016. “Fluorescence correlation spectroscopy as a sensitive and useful tool for revealing potential overlaps between the epitopes of monoclonal antibodies on viral particles,” mAbs, 8/7 (2016), 1235–1244 (DOI: 10.1080/19420862.2016.1212148).

Sharma, K. K., F. Przybilla, T. Restle, J. Godet, and Y. Mély 2016. “FRET-based assay to screen inhibitors of HIV-1 reverse transcriptase and nucleocapsid protein,” Nucleic Acids Research, 44/8 (2016), e74 (DOI: 10.1093/nar/gkv1532).

Shirota, K., K. Yagi, T. Inaba, P. C. Li, M. Murata, Y. Sugita, and T. Kobayashi 2016. “Detection of Sphingomyelin Clusters by Raman Spectroscopy,” Biophysical Journal, 111/5 (2016), 999–1007 (DOI: 10.1016/j.bpj.2016.07.035).

Sholokh, M., R. Improta, M. Mori, R. Sharma, C. Kenfack, D. Shin, K. Voltz, R. H. Stote, O. A. Zaporozhets, M. Botta, Y. Tor, and Y. Mély 2016. “Tautomers of a Fluorescent G Surrogate and Their Distinct Photophysics Provide Additional Information Channels,” Angewandte Chemie - International Edition, 55/28 (2016), 7974–7978 (DOI: 10.1002/anie.201601688).

Shulov, I., Y. Arntz, Y. Mély, V. G. Pivovarenko, and A. S. Klymchenko 2016. “Non-coordinating anions assemble cyanine amphiphiles into ultra-small fluorescent nanoparticles,” Chemical Communications, 52/51 (2016), 7962–7965 (DOI: 10.1039/c6cc03716j).

Simonsson, C., G. Bastiat, M. Pitorre, A. S. Klymchenko, J. Béjaud, Y. Mély, and J. P. Benoit 2016. “Inter-nanocarrier and nanocarrier-to-cell transfer assays demonstrate the risk of an immediate unloading of dye from labeled lipid nanocapsules,” European Journal of Pharmaceutics and Biopharmaceutics, 98 (2016), 47–56 (DOI: 10.1016/j.ejpb.2015.10.011).

Venugopal, S., D. B. Martinez-Arguelles, S. Chebbi, F. Hullin-Matsuda, T. Kobayashi, and V. Papadopoulos 2016. “Plasma membrane origin of the steroidogenic pool of cholesterol used in hormone-induced acute steroid formation in Leydig cells,” Journal of Biological Chemistry, 291/50 (2016), 26109–26125 (DOI: 10.1074/jbc.M116.740928).

Voltz, K., J. Lonard, P. T. Touceda, J. Conyard, Z. Chaker, A. Dejaegere, J. Godet, Y. Mely, S. Haacke, and R. H. Stote 2016. “Quantitative sampling of conformational heterogeneity of a DNA hairpin using molecular dynamics simulations and ultrafast fluorescence spectroscopy,” Nucleic Acids Research, 44/7 (2016), 3408–3419 (DOI: 10.1093/nar/gkw077).

Zamotaiev, O. M., V. Shvadchak, T. P. Sych, N. A. Melnychuk, D. Yushchenko, Y. Mely, and V. G. Pivovarenko 2016. “Environment-sensitive quinolone demonstrating long-lived fluorescence and unusually slow excited-state intramolecular proton transfer kinetics,” Methods and Applications in Fluorescence, 4/3 (2016), 34004 (DOI: 10.1088/2050-6120/4/3/034004).


Anton, H., N. Taha, E. Boutant, L. Richert, H. Khatter, B. Klaholz, P. Rondé, E. Réal, H. De Rocquigny, and Y. Mély 2015. “Investigating the cellular distribution and interactions of HIV-1 nucleocapsid protein by quantitative fluorescence microscopy,” PLoS ONE, 10/2 (2015), 116921 (DOI: 10.1371/journal.pone.0116921).

Attia, M. F., N. Anton, R. Bouchaala, P. Didier, Y. Arntz, N. Messaddeq, A. S. Klymchenko, Y. Mély, and T. F. Vandamme 2015. “Functionalization of nano-emulsions with an amino-silica shell at the oil-water interface,” RSC Advances, 5/91 (2015), 74353–74361 (DOI: 10.1039/c5ra12676b).

Barthes, N. P. F., I. A. Karpenko, D. Dziuba, M. Spadafora, J. Auffret, A. P. Demchenko, Y. Mély, R. Benhida, B. Y. Michel, and A. Burger 2015. “Development of environmentally sensitive fluorescent and dual emissive deoxyuridine analogues,” RSC Advances, 5/42 (2015), 33536–33545 (DOI: 10.1039/c5ra02709h).

Boukhari, A., M. Alhosin, C. Bronner, K. Sagini, C. Truchot, E. Sick, V. B. Schini-Kerth, P. André, Y. Mély, M. Mousli, and J. P. Gies 2015. “CD47 activation-induced UHRF1 over-expression is associated with silencing of tumor suppressor gene p16INK4A in glioblastoma cells,” Anticancer Research, 35/1 (2015), 149–158.

Collot, M., R. Kreder, A. L. Tatarets, L. D. Patsenker, Y. Mely, and A. S. Klymchenko 2015. “Bright fluorogenic squaraines with tuned cell entry for selective imaging of plasma membrane vs. endoplasmic reticulum,” Chemical Communications, 51/96 (2015), 17136–17139 (DOI: 10.1039/c5cc06094j).

El Meshri, S. E., D. Dujardin, J. Godet, L. Richert, C. Boudier, J. L. Darlix, P. Didier, Y. Mély, and H. De Rocquigny 2015. “Role of the nucleocapsid domain in HIV-1 gag oligomerization and trafficking to the plasma membrane: A fluorescence lifetime imaging microscopy investigation,” Journal of Molecular Biology, 427/6 (2015), 1480–1494 (DOI: 10.1016/j.jmb.2015.01.015).

Ghose, A., M. Rebarz, O. V. Maltsev, L. Hintermann, C. Ruckebusch, E. Fron, J. Hofkens, Y. Mély, P. Naumov, M. Sliwa, and P. Didier 2015. “Emission properties of oxyluciferin and its derivatives in water: Revealing the nature of the emissive species in firefly bioluminescence,” Journal of Physical Chemistry B, 119/6 (2015), 2638–2649 (DOI: 10.1021/jp508905m).

Greiner, V. J., L. Kovalenko, N. Humbert, L. Richert, C. Birck, M. Ruff, O. A. Zaporozhets, S. Dhe-Paganon, C. Bronner, and Y. Mély 2015. “Site-Selective Monitoring of the Interaction of the SRA Domain of UHRF1 with Target DNA Sequences Labeled with 2-Aminopurine,” Biochemistry, 54/39 (2015), 6012–6020 (DOI: 10.1021/acs.biochem.5b00419).

Karpenko, I. A., M. Collot, L. Richert, C. Valencia, P. Villa, Y. Mély, M. Hibert, D. Bonnet, and A. S. Klymchenko 2015. “Fluorogenic squaraine dimers with polarity-sensitive folding as bright far-red probes for background-free bioimaging,” Journal of the American Chemical Society, 137/1 (2015), 405–412 (DOI: 10.1021/ja5111267).

Karpenko, I. A., A. S. Klymchenko, S. Gioria, R. Kreder, I. Shulov, P. Villa, Y. Mély, M. Hibert, and D. Bonnet 2015. “Squaraine as a bright, stable and environment-sensitive far-red label for receptor-specific cellular imaging,” Chemical Communications, 51/14 (2015), 2960–2963 (DOI: 10.1039/c4cc09113b).

Kemmel, V., H. A. Mercoli, N. Meyer, D. Brumaru, B. Romain, J. M. Lessinger, and C. Brigand 2015. “Mitomycin C Pharmacokinetics as Predictor of Severe Neutropenia in Hyperthermic Intraperitoneal Therapy,” Annals of Surgical Oncology, 22 (2015), 873–879 (DOI: 10.1245/s10434-015-4679-9).

Kempf, N., P. Didier, V. Postupalenko, B. Bucher, and Y. Mély 2015. “Internalization mechanism of neuropeptide y bound to its Y1 receptor investigated by high resolution microscopy,” Methods and Applications in Fluorescence, 3/2 (2015), 25004 (DOI: 10.1088/2050-6120/3/2/025004).

Kempf, N., V. Postupalenko, S. Bora, P. Didier, Y. Arntz, H. de Rocquigny, and Y. Mély 2015. “The HIV-1 Nucleocapsid Protein Recruits Negatively Charged Lipids To Ensure Its Optimal Binding to Lipid Membranes,” Journal of Virology, 89/3 (2015), 1756–1767 (DOI: 10.1128/jvi.02931-14).

Khan, I. U., C. A. Serra, N. Anton, M. Er-Rafik, C. Blanck, M. Schmutz, I. Kraus, N. Messaddeq, C. Sutter, H. Anton, A. S. Klymchenko, and T. F. Vandamme 2015. “Microfluidic conceived Trojan microcarriers for oral delivery of nanoparticles,” International Journal of Pharmaceutics, 493/1-2 (2015), 7–15 (DOI: 10.1016/j.ijpharm.2015.06.028).

Kilin, V., O. Glushonkov, L. Herdly, A. Klymchenko, L. Richert, and Y. Mely 2015. “Fluorescence lifetime imaging of membrane lipid order with a ratiometric fluorescent probe,” Biophysical Journal, 108/10 (2015), 2521–2531 (DOI: 10.1016/j.bpj.2015.04.003).

Kreder, R., S. Oncul, O. A. Kucherak, K. A. Pyrshev, E. Real, Y. Mély, and A. S. Klymchenko 2015. “Blue fluorogenic probes for cell plasma membranes fill the gap in multicolour imaging,” RSC Advances, 5/29 (2015), 22899–22905 (DOI: 10.1039/c4ra16225k).

Kreder, R., K. A. Pyrshev, Z. Darwich, O. A. Kucherak, Y. Mély, and A. S. Klymchenko 2015. “Solvatochromic Nile Red Probes with FRET Quencher Reveal Lipid Order Heterogeneity in Living and Apoptotic Cells,” ACS Chemical Biology, 10/6 (2015), 1435–1442 (DOI: 10.1021/cb500922m).

Mori, M., L. Kovalenko, S. Lyonnais, D. Antaki, B. E. Torbett, M. Botta, G. Mirambeau, and Y. Mély 2015. “Nucleocapsid protein: A desirable target for future therapies against HIV-1,” Current Topics in Microbiology and Immunology, 389 (2015), 53–92 (DOI: 10.1007/82_2015_433).

Neuberg, P., A. Perino, E. Morin-Picardat, N. Anton, Z. Darwich, D. Weltin, Y. Mely, A. S. Klymchenko, J. S. Remy, and A. Wagner 2015. “Photopolymerized micelles of diacetylene amphiphile: Physical characterization and cell delivery properties,” Chemical Communications, 51/58 (2015), 11595–11598 (DOI: 10.1039/c5cc03820k).

Nguyen, A., M. Legrain, G. Noel, A. Coca, N. Meyer(EA), R. Schott, C. Lasthaus, M. Chenard, M. Gaub, J. Lessinger, D. Guenot, and N. Entz-Werle 2015. “An Innovative Fluorescent Semi-quantitative Methylation-specific PCR Method for the Determination of MGMT Promoter Methylation is Reflecting Intra-tumor Heterogeneity,” Current Cancer Drug Targets, 15/7 (2015), 624–640 (DOI: 10.2174/1568009615666150629130139).

O. Melezhyk, I., R. V. Rodik, N. V. Iavorska, A. S. Klymchenko, Y. Mely, V. V. Shepelevych, L. M. Skivka, and V. I. Kalchenko 2015. “Antibacterial Properties of Tetraalkylammonium and Imidazolium Tetraalkoxycalix[4]arene Derivatives,” Anti-Infective Agents, 13/1 (2015), 87–94 (DOI: 10.2174/2211352513666150327002110).

Postupalenko, V., D. Desplancq, I. Orlov, Y. Arntz, D. Spehner, Y. Mely, B. P. Klaholz, P. Schultz, E. Weiss, and G. Zuber 2015. “Protein Delivery System Containing a Nickel-Immobilized Polymer for Multimerization of Affinity-Purified His-Tagged Proteins Enhances Cytosolic Transfer,” Angewandte Chemie - International Edition, 54/36 (2015), 10583–10586 (DOI: 10.1002/anie.201505437).

Reisch, A., A. Runser, Y. Arntz, Y. Mély, and A. S. Klymchenko 2015. “Charge-controlled nanoprecipitation as a modular approach to ultrasmall polymer nanocarriers: Making bright and stable nanoparticles,” ACS Nano, 9/5 (2015), 5104–5116 (DOI: 10.1021/acsnano.5b00214).

Reix, N., A. Agin, S. Bahram, N. Dali-Youcef, D. Grucker, B. Jaulhac, Q. Lepiller, J. M. Lessinger, L. Mauvieux, L. Monier, F. Schramm, F. Stoll-Keller, L. Vallat, B. Ludes, E. Candolfi, and D. Filisetti 2015. “Amélioration continue du DES de biologie médicale à l’aide d’un carnet de stage et d’un questionnaire d’évaluation de la satisfaction,” Annales de Biologie Clinique, 73/3 (2015), 359–368 (DOI: 10.1684/abc.2015.1045).

Rodik, R. V., A. S. Anthony, V. I. Kalchenko, Y. Mély, and A. S. Klymchenko 2015. “Cationic amphiphilic calixarenes to compact DNA into small nanoparticles for gene delivery,” New Journal of Chemistry, 39/3 (2015), 1654–1664 (DOI: 10.1039/c4nj01395f).

Sharma, K. K., F. Przybilla, T. Restle, C. Boudier, J. Godet, and Y. Mély 2015. “Reverse Transcriptase in Action: FRET-Based Assay for Monitoring Flipping and Polymerase Activity in Real Time,” Analytical Chemistry, 87/15 (2015), 7690–7697 (DOI: 10.1021/acs.analchem.5b01126).

Sholokh, M., R. Sharma, D. Shin, R. Das, O. A. Zaporozhets, Y. Tor, and Y. Mély 2015. “Conquering 2-aminopurines deficiencies: Highly emissive isomorphic guanosine surrogate faithfully monitors guanosine conformation and dynamics in DNA,” Journal of the American Chemical Society, 137/9 (2015), 3185–3188 (DOI: 10.1021/ja513107r).

Sholokh, M., O. M. Zamotaiev, R. Das, V. Y. Postupalenko, L. Richert, D. Dujardin, O. A. Zaporozhets, V. G. Pivovarenko, A. S. Klymchenko, and Y. Mély 2015. “Fluorescent amino acid undergoing excited state intramolecular proton transfer for site-specific probing and imaging of peptide interactions,” Journal of Physical Chemistry B, 119/6 (2015), 2585–2595 (DOI: 10.1021/jp508748e).

Shulov, I., S. Oncul, A. Reisch, Y. Arntz, M. Collot, Y. Mely, and A. S. Klymchenko 2015. “Fluorinated counterion-enhanced emission of rhodamine aggregates: Ultrabright nanoparticles for bioimaging and light-harvesting,” Nanoscale, 7/43 (2015), 18198–18210 (DOI: 10.1039/c5nr04955e).

Trofymchuk, K., L. Prodi, A. Reisch, Y. Mély, K. Altenhöner, J. Mattay, and A. S. Klymchenko 2015. “Exploiting fast exciton diffusion in dye-doped polymer nanoparticles to engineer efficient photoswitching,” Journal of Physical Chemistry Letters, 6/12 (2015), 2259–2264 (DOI: 10.1021/acs.jpclett.5b00769).

Volz, Y., D. Koschut, A. Matzke-Ogi, M. S. Dietz, C. Karathanasis, L. Richert, M. G. Wagner, Y. Mély, M. Heilemann, H. H. Niemann, and V. Orian-Rousseau 2015. “Direct binding of hepatocyte growth factor and vascular endothelial growth factor to CD44v6,” Bioscience Reports, 35/4 (2015), 2015–2 64–1 (DOI: 10.1042/BSR20150093).


Attia, M. F., N. Anton, M. Chiper, R. Akasov, H. Anton, N. Messaddeq, S. Fournel, A. S. Klymchenko, Y. Mély, and T. F. Vandamme 2014. “Biodistribution of X-ray iodinated contrast agent in nano-emulsions is controlled by the chemical nature of the oily core,” ACS Nano, 8/10 (2014), 10537–10550 (DOI: 10.1021/nn503973z).

Boisramé-Helms, J., X. Delabranche, A. Klymchenko, J. Drai, E. Blond, F. Zobairi, Y. Mely, M. Hasselmann, F. Toti, and F. Meziani 2014. “Lipid emulsions differentially affect LPS-induced acute monocytes inflammation: In vitro effects on membrane remodeling and cell viability,” Lipids, 49/11 (2014), 1091–1099 (DOI: 10.1007/s11745-014-3930-7).

Boudier, C., N. Humbert, F. OiseChaminade, Y. Chen, H. Rocquigny, J. Godet, O. Mauffret, P. Fossé, and Y. Mély 2014. “Dynamic interactions of the HIV-1 Tat with nucleic acids are critical for Tat activity in reverse transcription,” Nucleic Acids Research, 42/2 (2014), 1065–1078 (DOI: 10.1093/nar/gkt934).

Darlix, J. L., H. de Rocquigny, O. Mauffret, and Y. Mély 2014. “Retrospective on the all-in-one retroviral nucleocapsid protein,” Virus Research, 193 (2014), 2–15 (DOI: 10.1016/j.virusres.2014.05.011).

Darwich, Z., A. S. Klymchenko, D. Dujardin, and Y. Mély 2014. “Imaging lipid order changes in endosome membranes of live cells by using a Nile Red-based membrane probe,” RSC Advances, 4/17 (2014), 8481–8488 (DOI: 10.1039/c3ra47181k).

Darwich, Z., A. S. Klymchenko, and Y. Mély 2014. “Monitoring membrane properties and apoptosis using membrane probes of the 3-Hydroxyflavone Family,” Methods in Molecular Biology, 1076 (2014), 419–430 (DOI: 10.1007/978-1-62703-649-8_17).

Das, R., G. Duportail, A. Ghose, L. Richert, A. Klymchenko, S. Chakraborty, S. Yesylevskyy, and Y. Mely 2014. “Tuning excited-state proton transfer dynamics of a 3-hydroxychromone dye in supramolecular complexes via host-guest steric compatibility,” Physical Chemistry Chemical Physics, 16/2 (2014), 776–784 (DOI: 10.1039/c3cp52597j).

Doebelin, C., P. Wagner, F. Bihel, N. Humbert, C. A. Kenfack, Y. Mely, J. J. Bourguignon, and M. Schmitt 2014. “Fully regiocontrolled polyarylation of pyridine,” Journal of Organic Chemistry, 79/3 (2014), 908–918 (DOI: 10.1021/jo402200q).

Dziuba, D., I. A. Karpenko, N. P. F. Barthes, B. Y. Michel, A. S. Klymchenko, R. Benhida, A. P. Demchenko, Y. Mély, and A. Burger 2014. “Rational design of a solvatochromic fluorescent uracil analogue with a dual-band ratiometric response based on 3-hydroxychromone,” Chemistry - A European Journal, 20/7 (2014), 1998–2009 (DOI: 10.1002/chem.201303399).

Ferrand, A., S. Eap, L. Richert, S. Lemoine, D. Kalaskar, S. Demoustier-Champagne, H. Atmani, Y. Mély, F. Fioretti, G. Schlatter, L. Kuhn, G. Ladam, and N. Benkirane-Jessel 2014. “Osteogenetic properties of electrospun nanofibrous PCL scaffolds equipped with chitosan-based nanoreservoirs of growth factors,” Macromolecular Bioscience, 14/1 (2014), 45–55 (DOI: 10.1002/mabi.201300283).

Greiner, V. J., C. Manin, E. Larquet, N. Ikhelef, F. Gréco, S. Naville, P. E. Milhiet, F. Ronzon, A. Klymchenko, and Y. Mély 2014. “Characterization of the structural modifications accompanying the loss of HBsAg particle immunogenicity,” Vaccine, 32/9 (2014), 1049–1054 (DOI: 10.1016/j.vaccine.2014.01.012).

Jain, N., Y. Arntz, S. Ercelen, K. Trofymchuk, Y. Mely, and A. S. Klymchenko 2014. “Synthesis and self-assembly of new unsymmetrical bolaamphiphiles: spontaneous monolayer formation on mica surface,” J. Nanosci. Lett., 4/Copyright (C) 2015 American Chemical Society (ACS). All Rights Reserved. (2014), Jain/1–Jain/7, 7pp.

Karpenko, I. A., R. Kreder, C. Valencia, P. Villa, C. Mendre, B. Mouillac, Y. Mély, M. Hibert, D. Bonnet, and A. S. Klymchenko 2014. “Red fluorescent turn-on ligands for imaging and quantifying G protein-coupled receptors in living cells,” ChemBioChem, 15/3 (2014), 359–363 (DOI: 10.1002/cbic.201300738).

Kilin, V. N., H. Anton, N. Anton, E. Steed, J. Vermot, T. F. Vandamme, Y. Mely, and A. S. Klymchenko 2014. “Counterion-enhanced cyanine dye loading into lipid nano-droplets for single-particle tracking in zebrafish,” 35th (2014), 4950–4957 (DOI: 10.1016/j.biomaterials.2014.02.053).

Klymchenko, A. S. and R. Kreder 2014. “Fluorescent probes for lipid rafts: From model membranes to living cells,” Chemistry and Biology, 21/1 (2014), 97–113 (DOI: 10.1016/j.chembiol.2013.11.009).

Maillot, S., A. Carvalho, J. P. Vola, C. Boudier, Y. Mély, S. Haacke, and J. Léonard 2014. “Out-of-equilibrium biomolecular interactions monitored by picosecond fluorescence in microfluidic droplets,” Lab on a Chip, 14/10 (2014), 1767–1774 (DOI: 10.1039/c3lc51283e).

Maurer, S. P., N. I. Cade, G. Bohner, N. Gustafsson, E. Boutant, and T. Surrey 2014. “EB1 accelerates two conformational transitions important for microtubule maturation and dynamics,” Current Biology, 24/4 (2014), 372–384 (DOI: 10.1016/j.cub.2013.12.042).

Mori, M., A. Nucci, M. C. D. Lang, N. Humbert, C. Boudier, F. Debaene, S. Sanglier-Cianferani, M. Catala, P. Schult-Dietrich, U. Dietrich, C. Tisné, Y. Mely, and M. Botta 2014. “Functional and structural characterization of 2-amino-4-phenylthiazole inhibitors of the HIV-1 nucleocapsid protein with antiviral activity,” ACS Chemical Biology, 9/9 (2014), 1950–1955 (DOI: 10.1021/cb500316h).

Niehl, A., A. Pasquier, I. Ferriol, Y. Mély, and M. Heinlein 2014. “Comparison of the Oilseed rape mosaic virus and Tobacco mosaic virus movement proteins (MP) reveals common and dissimilar MP functions for tobamovirus spread,” Virology, 456-457/1 (2014), 43–54 (DOI: 10.1016/j.virol.2014.03.007).

Niko, Y., Y. Arntz, Y. Mely, G. I. Konishi, and A. S. Klymchenko 2014. “Disassembly-Driven Fluorescence Turn-on of Polymerized Micelles by Reductive Stimuli in Living Cells,” Chemistry - A European Journal, 20/50 (2014), 16473–16477 (DOI: 10.1002/chem.201405040).

Reisch, A., P. Didier, L. Richert, S. Oncul, Y. Arntz, Y. Mély, and A. S. Klymchenko 2014. “Collective fluorescence switching of counterion-assembled dyes in polymer nanoparticles,” Nature Communications, 5 (2014), 4089 (DOI: 10.1038/ncomms5089).

Reisch, A., E. Roger, T. Phoeung, C. Antheaume, C. Orthlieb, F. Boulmedais, P. Lavalle, J. B. Schlenoff, B. Frisch, and P. Schaaf 2014. “On the benefits of rubbing salt in the cut: Self-healing of saloplastic PAA/PAH compact polyelectrolyte complexes,” Advanced Materials, 26/16 (2014), 2547–2551 (DOI: 10.1002/adma.201304991).

Rocquigny, H. de, S. E. El Meshri, L. Richert, P. Didier, J. L. Darlix, and Y. Mély 2014. Role of the nucleocapsid region in HIV-1 Gag assembly as investigated by quantitative fluorescence-based microscopy, 193rd (2014), 78–88 (DOI: 10.1016/j.virusres.2014.06.009).

Rodik, R. V., A. S. Klymchenko, Y. Mely, and V. I. Kalchenko 2014. “Calixarenes and related macrocycles as gene delivery vehicles,” Journal of Inclusion Phenomena and Macrocyclic Chemistry, 80/3-4 (2014), 189–200 (DOI: 10.1007/s10847-014-0412-8).

Ronde-Oustau, C., Y. Diesinger, J. Y. Jenny, M. Antoni, J. Gaudias, C. Boeri, J. Sibilia, and J. M. Lessinger 2014. “Diagnostic accuracy of intra-articular C-reactive protein assay in periprosthetic knee joint infection - a preliminary study,” Orthopaedics and Traumatology: Surgery and Research, 100/2 (2014), 221–224 (DOI: 10.1016/j.otsr.2013.10.017).

Sasaki, S., Y. Niko, A. S. Klymchenko, and G. I. Konishi 2014. “Design of donor-acceptor geometry for tuning excited-state polarization: Fluorescence solvatochromism of push-pull biphenyls with various torsional restrictions on their aryl-aryl bonds,” Tetrahedron, 70/41 (2014), 7551–7559 (DOI: 10.1016/j.tet.2014.08.002).

Saxena, R., S. Shrivastava, S. Haldar, A. S. Klymchenko, and A. Chattopadhyay 2014. “Location, dynamics and solvent relaxation of a nile red-based phase-sensitive fluorescent membrane probe,” Chemistry and Physics of Lipids, 183 (2014), 1–8 (DOI: 10.1016/j.chemphyslip.2014.04.007).

Trofymchuk, K., A. Reisch, I. Shulov, Y. Mély, and A. S. Klymchenko 2014. “Tuning the color and photostability of perylene diimides inside polymer nanoparticles: Towards biodegradable substitutes of quantum dots,” Nanoscale, 6/21 (2014), 12934–12942 (DOI: 10.1039/c4nr03718a).

Valanciunaite, J., A. S. Klymchenko, A. Skripka, L. Richert, S. Steponkiene, G. Streckyte, Y. Mely, and R. Rotomskis 2014. “A non-covalent complex of quantum dots and chlorin e6: Efficient energy transfer and remarkable stability in living cells revealed by FLIM,” RSC Advances, 4/94 (2014), 52270–52278 (DOI: 10.1039/c4ra09998b).

Van Hell, A. J., A. Klymchenko, D. M. Gueth, W. J. Van Blitterswijk, G. A. Koning, and M. Verheij 2014. “Membrane organization determines barrier properties of endothelial cells and short-chain sphingolipid-facilitated doxorubicin influx,” Biochimica et Biophysica Acta - Molecular and Cell Biology of Lipids, 1841/9 (2014), 1301–1307 (DOI: 10.1016/j.bbalip.2014.06.006).

Wang, X., B. Piro, S. Reisberg, G. Anquetin, H. de Rocquigny, P. Jiang, Q. Wang, W. Wu, M. C. Pham, and C. Z. Dong 2014. “Direct, reagentless electrochemical detection of the BIR3 domain of X-linked inhibitor of apoptosis protein using a peptide-based conducting polymer sensor,” Biosensors and Bioelectronics, 61 (2014), 57–62 (DOI: 10.1016/j.bios.2014.04.047).

Zamotaiev, O. M., V. Y. Postupalenko, V. V. Shvadchak, V. G. Pivovarenko, A. S. Klymchenko, and Y. Mély 2014. “Monitoring penetratin interactions with lipid membranes and cell internalization using a new hydration-sensitive fluorescent probe,” Organic and Biomolecular Chemistry, 12/36 (2014), 7036–7044 (DOI: 10.1039/c4ob01242a).

Zargarian, L., C. Tisné, P. Barraud, X. Xu, N. Morellet, B. René, Y. Meĺy, P. Fossé, and O. Mauffret 2014. “Dynamics of linker residues modulate the nucleic acid binding properties of the HIV-1 nucleocapsid protein zinc fingers,” PLoS ONE, 9/7 (2014), –3 23–1 (DOI: 10.1371/journal.pone.0102150).


Achour, M., M. Mousli, M. Alhosin, A. Ibrahim, J. Peluso, C. D. Muller, V. B. Schini-Kerth, A. Hamiche, S. Dhe-Paganon, and C. Bronner 2013. “Epigallocatechin-3-gallate up-regulates tumor suppressor gene expression via a reactive oxygen species-dependent down-regulation of UHRF1,” Biochemical and Biophysical Research Communications, 430/1 (2013), 208–212 (DOI: 10.1016/j.bbrc.2012.11.087).

Baltzinger, M., K. K. Sharma, Y. Mély, and D. Altschuh 2013. “Dissecting the oligonucleotide binding properties of a disordered chaperone protein using surface plasmon resonance,” Nucleic Acids Research, 41/22 (2013), 10414–10425 (DOI: 10.1093/nar/gkt792).

Batisse, J., S. X. Guerrero, S. Bernacchi, L. Richert, J. Godet, V. Goldschmidt, Y. Mely, R. Marquet, H. de Rocquigny, and J.-C. Paillart 2013. “APOBEC3G Impairs the Multimerization of the HIV-1 Vif Protein in Living Cells,” Journal of Virology, 87/11 (2013), 6492–6506 (DOI: 10.1128/jvi.03494-12).

Beerens, N., M. D. E. Jepsen, V. Nechyporuk-Zloy, A. C. Krüger, J. L. Darlix, J. Kjems, and V. Birkedal 2013. “Role of the primer activation signal in tRNA annealing onto the HIV-1 genome studied by single-molecule FRET microscopy,” Rna, 19/4 (2013), 517–526 (DOI: 10.1261/rna.035733.112).

Bronner, C., M. Krifa, and M. Mousli 2013. “Increasing role of UHRF1 in the reading and inheritance of the epigenetic code as well as in tumorogenesis,” Biochemical Pharmacology, 86/12 (2013), 1643–1649 (DOI: 10.1016/j.bcp.2013.10.002).

Chahed Bel-Ochi, N., A. Bouratbine, and M. Mousli 2013. “Design and characterization of a recombinant colorimetric SAG1-alkaline phosphatase conjugate to detect specific antibody responses against Toxoplasma gondii,” Journal of Immunological Methods, 394/1-2 (2013), 107–114 (DOI: 10.1016/j.jim.2013.05.010).

Coughlin, J. E., A. Reisch, M. Z. Markarian, and J. B. Schlenoff 2013. “Sulfonation of polystyrene: Toward the "ideal" polyelectrolyte,” Journal of Polymer Science, Part A: Polymer Chemistry, 51/11 (2013), 2416–2424 (DOI: 10.1002/pola.26627).

Darwich, Z., O. A. Kucherak, R. Kreder, L. Richert, R. Vauchelles, Y. Mély, and A. S. Klymchenko 2013. “Rational design of fluorescent membrane probes for apoptosis based on 3-hydroxyflavone,” Methods and Applications in Fluorescence, 1/2 (2013), 25002 (DOI: 10.1088/2050-6120/1/2/025002).

Ftouni, H., F. Bolze, H. De Rocquigny, and J. F. Nicoud 2013. “Functionalized two-photon absorbing diketopyrrolopyrrole-based fluorophores for living cells fluorescent microscopy,” Bioconjugate Chemistry, 24/6 (2013), 942–950 (DOI: 10.1021/bc300623q).

Godet, J., C. Kenfack, F. Przybilla, L. Richert, G. Duportail, and Y. Mély 2013. “Site-selective probing of cTAR destabilization highlights the necessary plasticity of the HIV-1 nucleocapsid protein to chaperone the first strand transfer,” Nucleic Acids Research, 41/9 (2013), 5036–5048 (DOI: 10.1093/nar/gkt164).

Guerrini, M., S. Elli, P. Mourier, T. R. Rudd, D. Gaudesi, B. Casu, C. Boudier, G. Torri, and C. Viskov 2013. “An unusual antithrombin-binding heparin octasaccharide with an additional 3-O-sulfated glucosamine in the active pentasaccharide sequence,” Biochemical Journal, 449/2 (2013), 343–351 (DOI: 10.1042/BJ20121309).

Koutsopoulos, O. S., C. Kretz, C. M. Weller, A. Roux, H. Mojzisova, J. Böhm, C. Koch, A. Toussaint, E. Heckel, D. Stemkens, S. A. J. Ter Horst, C. Thibault, M. Koch, S. Q. Mehdi, E. K. Bijlsma, J. L. Mandel, J. Vermot, and J. Laporte 2013. “Dynamin 2 homozygous mutation in humans with a lethal congenital syndrome,” European Journal of Human Genetics, 21/6 (2013), 637–642 (DOI: 10.1038/ejhg.2012.226).

Krifa, M., M. Alhosin, C. D. Muller, J. P. Gies, L. Chekir-Ghedira, K. Ghedira, Y. Mély, C. Bronner, and M. Mousli 2013. “Limoniastrum guyonianum aqueous gall extract induces apoptosis in human cervical cancer cells involving p16§ssup§INK4A§esup§ re-expression related to UHRF1 and DNMT1 down-regulation,” Journal of Experimental and Clinical Cancer Research, 32/1 (2013), 30 (DOI: 10.1186/1756-9966-32-30).

Maillot, B., N. Lévy, S. Eiler, C. Crucifix, F. Granger, L. Richert, P. Didier, J. Godet, K. Pradeau-Aubreton, S. Emiliani, A. Nazabal, P. Lesbats, V. Parissi, Y. Mely, D. Moras, P. Schultz, and M. Ruff 2013. “Structural and Functional Role of INI1 and LEDGF in the HIV-1 Preintegration Complex,” PLoS ONE, 8/4 (2013), e60734 (DOI: 10.1371/journal.pone.0060734).

Monot, C., M. Kuciak, S. Viollet, A. A. Mir, C. Gabus, J. L. Darlix, and G. Cristofari 2013. “The Specificity and Flexibility of L1 Reverse Transcription Priming at Imperfect T-Tracts,” PLoS Genetics, 9/5 (2013), 2013–8 90 (DOI: 10.1371/journal.pgen.1003499).

Postupalenko, V. Y., O. M. Zamotaiev, V. V. Shvadchak, A. V. Strizhak, V. G. Pivovarenko, A. S. Klymchenko, and Y. Mely 2013. “Dual-fluorescence l -amino acid reports insertion and orientation of melittin peptide in cell membranes,” Bioconjugate Chemistry, 24/12 (2013), 1998–2007 (DOI: 10.1021/bc400325n).

Prodanov, M. F., N. V. Pogorelova, A. P. Kryshtal, A. S. Klymchenko, Y. Mely, V. P. Semynozhenko, A. I. Krivoshey, Y. A. Reznikov, S. N. Yarmolenko, J. W. Goodby, and V. V. Vashchenko 2013. “Thermodynamically stable dispersions of quantum dots in a nematic liquid crystal,” 29th (2013), 9301–9309 (DOI: 10.1021/la401475b).

Reisch, A., P. Tirado, E. Roger, F. Boulmedais, D. Collin, J. C. Voegel, B. Frisch, P. Schaaf, and J. B. Schlenoff 2013. “Compact saloplastic poly(acrylic acid)/poly(allylamine) complexes: Kinetic control over composition, microstructure, and mechanical properties,” Advanced Functional Materials, 23/6 (2013), 673–682 (DOI: 10.1002/adfm.201201413).

Rinaldi, A. S., G. Freund, D. Desplancq, A. P. Sibler, M. Baltzinger, N. Rochel, Y. Mély, P. Didier, and E. Weiss 2013. “The use of fluorescent intrabodies to detect endogenous gankyrin in living cancer cells,” Experimental Cell Research, 319/6 (2013), 838–849 (DOI: 10.1016/j.yexcr.2013.01.011).

Tirado, P., A. Reisch, E. Roger, F. Boulmedais, L. Jierry, P. Lavalle, J. C. Voegel, P. Schaaf, J. B. Schlenoff, and B. Frisch 2013. “Catalytic saloplastics: Alkaline phosphatase immobilized and stabilized in compacted polyelectrolyte complexes,” Advanced Functional Materials, 23/38 (2013), 4785–4792 (DOI: 10.1002/adfm.201300117).

Viskov, C., S. Elli, E. Urso, D. Gaudesi, P. Mourier, F. Herman, C. Boudier, B. Casu, G. Torri, and M. Guerrini 2013. “Heparin dodecasaccharide containing two antithrombin-binding pentasaccharides: Structural features and biological properties,” Journal of Biological Chemistry, 288/36 (2013), 25895–25907 (DOI: 10.1074/jbc.M113.485268).

Ziomkiewicz, I., A. Loman, R. Klement, C. Fritsch, A. S. Klymchenko, G. Bunt, T. M. Jovin, and D. J. Arndt-Jovin 2013. “Dynamic conformational transitions of the EGF receptor in living mammalian cells determined by FRET and fluorescence lifetime imaging microscopy,” Cytometry Part A, 83/9 (2013), 794–805 (DOI: 10.1002/cyto.a.22311).


Anton, N., F. Bally, C. A. Serra, A. Ali, Y. Arntz, Y. Mely, M. Zhao, E. Marchioni, A. Jakhmola, and T. F. Vandamme 2012. “A new microfluidic setup for precise control of the polymer nanoprecipitation process and lipophilic drug encapsulation,” Soft Matter, 8/41 (2012), 10628–10635 (DOI: 10.1039/c2sm25357g).

Avilov, S. V., C. Boudier, M. Gottikh, J. L. Darlix, and Y. Mély 2012. “Characterization of the inhibition mechanism of HIV-1 nucleocapsid protein chaperone activities by methylated oligoribonucleotides,” Antimicrobial Agents and Chemotherapy, 56/2 (2012), 1010–1018 (DOI: 10.1128/AAC.05614-11).

Baati, R., D. Ihiawakrim, R. R. Mafouana, O. Ersen, C. Dietlin, and G. Duportail 2012. “Hexahistidine-tagged single-walled carbon nanotubes (His 6-tagSWNTs): A multifunctional hard template for hierarchical directed self-assembly and nanocomposite construction,” Advanced Functional Materials, 22/19 (2012), 4009–4015 (DOI: 10.1002/adfm.201200354).

Bassard, J. E., L. Richert, J. Geerinck, H. Renault, F. Duval, P. Ullmann, M. Schmitt, E. Meyer, J. Mutterer, W. Boerjan, G. de Jaeger, Y. Mely, A. Goossens, and D. Werck-Reichhart 2012. “Protein-protein and protein-membrane associations in the lignin pathwayw oa,” Plant Cell, 24/11 (2012), 4465–4482 (DOI: 10.1105/tpc.112.102566).

Batisse, J., S. Guerrero, S. Bernacchi, D. Sleiman, C. Gabus, J. L. Darlix, R. Marquet, C. Tisné, and J. C. Paillart 2012. “The role of Vif oligomerization and RNA chaperone activity in HIV-1 replication,” Virus Research, 169/2 (2012), 361–376 (DOI: 10.1016/j.virusres.2012.06.018).

Bazzi, A., L. Zargarian, F. Chaminade, H. de Rocquigny, B. René, Y. Mély, P. Fossé, and O. Mauffret 2012. “Intrinsic nucleic acid dynamics modulates HIV-1 nucleocapsid protein binding to its targets,” PLoS ONE, 7/6 (2012), e38905 (DOI: 10.1371/journal.pone.0038905).

Bolze, F., J. F. Nicoud, C. Bourgogne, S. Gug, X. H. Sun, M. Goeldner, A. Specht, L. Donato, D. Warther, G. F. Turi, and A. Losonczy 2012. “Two-photon uncaging: The chemist point of view,” Optical Materials, 34/10 (2012), 1664–1669 (DOI: 10.1016/j.optmat.2012.03.007).

Brandel, J., N. Humbert, M. Elhabiri, I. J. Schalk, G. L. A. Mislin, and A. M. Albrecht-Gary 2012. “Pyochelin, a siderophore of Pseudomonas aeruginosa: Physicochemical characterization of the iron(iii), copper(ii) and zinc(ii) complexes,” Dalton Transactions, 41/9 (2012), 2820–2834 (DOI: 10.1039/c1dt11804h).

Chamontin, C., B. Yu, P. J. Racine, J. L. Darlix, and M. Mougel 2012. “MoMuLV and HIV-1 Nucleocapsid Proteins Have a Common Role in Genomic RNA Packaging but Different in Late Reverse Transcription,” PLoS ONE, 7/12 (2012), 2012–4 01 (DOI: 10.1371/journal.pone.0051534).

Chiantia, S., A. S. Klymchenko, and E. London 2012. “A novel leaflet-selective fluorescence labeling technique reveals differences between inner and outer leaflets at high bilayer curvature,” Biochimica et Biophysica Acta - Biomembranes, 1818/5 (2012), 1284–1290 (DOI: 10.1016/j.bbamem.2012.02.005).

Cosset, E. C., J. Godet, N. Entz-Werlé, E. Guérin, D. Guenot, S. Froelich, D. Bonnet, S. Pinel, F. Plenat, P. Chastagner, M. Dontenwill, and S. Martin 2012. “Involvement of the TGFbeta pathway in the regulation of alpha5 beta 1 integrins by caveolin-1 in human glioblastoma,” International Journal of Cancer, 131/3 (2012), 601–611 (DOI: 10.1002/ijc.26415).

Darwich, Z., A. S. Klymchenko, O. A. Kucherak, L. Richert, and Y. Mély 2012. “Detection of apoptosis through the lipid order of the outer plasma membrane leaflet,” Biochimica et Biophysica Acta - Biomembranes, 1818/12 (2012), 3048–3054 (DOI: 10.1016/j.bbamem.2012.07.017).

Das, R., G. Duportail, L. Richert, A. Klymchenko, and Y. Mély 2012. “Sensing micelle hydration by proton-transfer dynamics of a 3-hydroxychromone dye: Role of the surfactant headgroup and chain length,” Langmuir, 28/18 (2012), 7147–7159 (DOI: 10.1021/la300103a).

Diesinger, Y., Y. P. Charles, D. Bouaka, J. Godet, and J. P. Steib 2012. “Preoperative phlebography in anterior L4-L5 disc approach. Clinical experience about 63 cases,” Orthopaedics and Traumatology: Surgery and Research, 98/8 (2012), 887–893 (DOI: 10.1016/j.otsr.2012.09.011).

Donato, L., A. Mourot, C. M. Davenport, C. Herbivo, D. Warther, J. Léonard, F. Bolze, J. F. Nicoud, R. H. Kramer, M. Goeldner, and A. Specht 2012. “Water-soluble, donor-acceptor biphenyl derivatives in the 2-(o-nitrophenyl)propyl series: Highly efficient two-photon uncaging of the neurotransmitter gama-aminobutyric acid at lambda=800 nm,” Angewandte Chemie - International Edition, 51/8 (2012), 1840–1843 (DOI: 10.1002/anie.201106559).

Dziuba, D., V. Y. Postupalenko, M. Spadafora, A. S. Klymchenko, V. Guérineau, Y. Mély, R. Benhida, and A. Burger 2012. “A universal nucleoside with strong two-band switchable fluorescence and sensitivity to the environment for investigating DNA interactions,” Journal of the American Chemical Society, 134/24 (2012), 10209–10213 (DOI: 10.1021/ja3030388).

Godet, J., C. Boudier, N. Humbert, R. Ivanyi-Nagy, J. L. Darlix, and Y. Mély 2012. “Comparative nucleic acid chaperone properties of the nucleocapsid protein NCp7 and Tat protein of HIV-1,” Virus Research, 169/2 (2012), 349–360 (DOI: 10.1016/j.virusres.2012.06.021).

Greiner, V. J., F. Ronzon, E. Larquet, B. Desbat, C. Estèves, J. Bonvin, F. Gréco, C. Manin, A. S. Klymchenko, and Y. Mély 2012. “The structure of HBsAg particles is not modified upon their adsorption on aluminium hydroxide gel,” Vaccine, 30/35 (2012), 5240–5245 (DOI: 10.1016/j.vaccine.2012.05.082).

Ivanyi-Nagy, R. and J. L. Darlix 2012. “Reprint of: Core protein-mediated 5’-3’ annealing of the West Nile virus genomic RNA in vitro,” Virus Research, 169/2 (2012), 448–457 (DOI: 10.1016/j.virusres.2012.09.009).

Jain, N., V. Goldschmidt, S. Oncul, Y. Arntz, G. Duportail, Y. Mély, and A. S. Klymchenko 2012. “Lactose-ornithine bolaamphiphiles for efficient gene delivery in vitro,” International Journal of Pharmaceutics, 423/2 (2012), 392–400 (DOI: 10.1016/j.ijpharm.2011.12.026).

Janouskova, H., A. Maglott, D. Y. Leger, C. Bossert, F. Noulet, E. Guerin, D. Guenot, S. Pinel, P. Chastagner, F. Plenat, N. Entz-Werle, J. Lehmann-Che, J. Godet, S. Martin, J. Teisinger, and M. Dontenwill 2012. “Integrin alpha 5 beta1 plays a critical role in resistance to temozolomide by interfering with the p53 pathway in high-grade glioma,” Cancer Research, 72/14 (2012), 3463–3470 (DOI: 10.1158/0008-5472.CAN-11-4199).

Jouonang, A. L., P. Didier, and Y. Mély 2012. “Identification of a thermally activated process in the Cy3 photobleaching mechanism,” Physical Chemistry Chemical Physics, 14/5 (2012), 1585–1588 (DOI: 10.1039/c2cp22334a).

Kenfack, C. A., A. S. Klymchenko, G. Duportail, A. Burger, and Y. Mély 2012. “Ab initio study of the solvent H-bonding effect on ESIPT reaction and electronic transitions of 3-hydroxychromone derivatives,” Physical Chemistry Chemical Physics, 14/25 (2012), 8910–8918 (DOI: 10.1039/c2cp40869d).

Klymchenko, A. S., E. Roger, N. Anton, H. Anton, I. Shulov, J. Vermot, Y. Mely, and T. F. Vandamme 2012. “Highly lipophilic fluorescent dyes in nano-emulsions: Towards bright non-leaking nano-droplets,” RSC Advances, 2/31 (2012), 11876–11886 (DOI: 10.1039/c2ra21544f).

Kucherak, O. A., L. Richert, Y. Mély, and A. S. Klymchenko 2012. “Dipolar 3-methoxychromones as bright and highly solvatochromic fluorescent dyes,” Physical Chemistry Chemical Physics, 14/7 (2012), 2292–2300 (DOI: 10.1039/c2cp23037b).

Leriche, G., G. Budin, Z. Darwich, D. Weltin, Y. Mély, A. S. Klymchenko, and A. Wagner 2012. “A fret-based probe with a chemically deactivatable quencher,” Chemical Communications, 48/26 (2012), 3224–3226 (DOI: 10.1039/c2cc17542h).

Lovett-Barron, M., G. F. Turi, P. Kaifosh, P. H. Lee, F. Bolze, X. H. Sun, J. F. Nicoud, B. V. Zemelman, S. M. Sternson, and A. Losonczy 2012. “Regulation of neuronal input transformations by tunable dendritic inhibition,” Nature Neuroscience, 15/3 (2012), 423–430 (DOI: 10.1038/nn.3024).

Lutz, V., C. Francès, D. Bessis, A. Cosnes, N. Kluger, J. Godet, E. Sauleau, and D. Lipsker 2012. “High frequency of genital lichen sclerosus in a prospective series of 76 patients with morphea: Toward a better understanding of the spectrum of morphea,” Archives of Dermatology, 148/1 (2012), 24–28 (DOI: 10.1001/archdermatol.2011.305).

Lux, J., E. J. Peña, F. Bolze, M. Heinlein, and J. F. Nicoud 2012. “Malachite Green Derivatives for Two-Photon RNA Detection,” ChemBioChem, 13/8 (2012), 1206–1213 (DOI: 10.1002/cbic.201100747).

Mori, M., P. Schult-Dietrich, B. Szafarowicz, N. Humbert, F. Debaene, S. Sanglier-Cianferani, U. Dietrich, Y. Mély, and M. Botta 2012. “Use of virtual screening for discovering antiretroviral compounds interacting with the HIV-1 nucleocapsid protein,” Virus Research, 169/2 (2012), 377–387 (DOI: 10.1016/j.virusres.2012.05.011).

Niehl, A., K. Amari, D. Gereige, K. Brandner, Y. Mély, and M. Heinlein 2012. “Control of Tobacco mosaic virus movement protein fate by CELL-DIVISION-CYCLE protein48,” Plant Physiology, 160/4 (2012), 2093–2108 (DOI: 10.1104/pp.112.207399).

Pivovarenko, V. G., O. M. Zamotaiev, V. V. Shvadchak, V. Y. Postupalenko, A. S. Klymchenko, and Y. Mély 2012. “Quantification of local hydration at the surface of biomolecules using dual-fluorescence labels,” Journal of Physical Chemistry A, 116/12 (2012), 3103–3109 (DOI: 10.1021/jp2101732).

Robial, N., Y. P. Charles, I. Bogorin, J. Godet, R. Beaujeux, F. Boujan, and J. P. Steib 2012. “Is preoperative embolization a prerequisite for spinal metastases surgical management?” Revue de Chirurgie Orthopedique et Traumatologique, 98/5 (2012), 470–471 (DOI: 10.1016/j.rcot.2012.06.054).

Sharma, K. K., H. De Rocquigny, J. L. Darlix, J. P. Lavergne, F. Pénin, J. M. Lessinger, and Y. Mély 2012. “Analysis of the RNA chaperoning activity of the hepatitis C virus core protein on the conserved 3′X region of the viral genome,” Nucleic Acids Research, 40/6 (2012), 2540–2553 (DOI: 10.1093/nar/gkr1140).

Specht, A., F. Bolze, L. Donato, C. Herbivo, S. Charon, D. Warther, S. Gug, J. F. Nicoud, and M. Goeldner 2012. “The donor-acceptor biphenyl platform: A versatile chromophore for the engineering of highly efficient two-photon sensitive photoremovable protecting groups,” Photochemical and Photobiological Sciences, 11/3 (2012), 578–586 (DOI: 10.1039/c2pp05360h).

Strizhak, A. V., V. Y. Postupalenko, V. V. Shvadchak, N. Morellet, E. Guittet, V. G. Pivovarenko, A. S. Klymchenko, and Y. Mély 2012. “Two-color fluorescent L-amino acid mimic of tryptophan for probing peptide-nucleic acid complexes,” Bioconjugate Chemistry, 23/12 (2012), 2434–2443 (DOI: 10.1021/bc300464u).

Tellier, F., J. Steibel, R. Chabrier, F. X. Blé, H. Tubaldo, R. Rasata, J. Chambron, G. Duportail, H. Simon, J.-F. Rodier, and P. Poulet 2012. “Sentinel lymph nodes fluorescence detection and imaging using Patent Blue V bound to human serum albumin,” Biomedical Optics Express, 3/9 (2012), 2306 (DOI: 10.1364/boe.3.002306).

Vercruysse, T., B. Basta, W. Dehaen, N. Humbert, J. Balzarini, F. Debaene, S. Sanglier-Cianférani, C. Pannecouque, Y. Mély, and D. Daelemans 2012. “A phenyl-thiadiazolylidene-amine derivative ejects zinc from retroviral nucleocapsid zinc fingers and inactivates HIV virions,” Retrovirology, 9/1 (2012), 95 (DOI: 10.1186/1742-4690-9-95).

Woldt, E., J. Terrand, M. Mlih, R. L. Matz, V. Bruban, F. Coudane, S. Foppolo, Z. El Asmar, M. E. Chollet, E. Ninio, A. Bednarczyk, D. Thiersé, C. Schaeffer, A. Van Dorsselaer, C. Boudier, W. Wahli, P. Chambon, D. Metzger, J. Herz, and P. Boucher 2012. “The nuclear hormone receptor PPAR gama counteracts vascular calcification by inhibiting Wnt5a signalling in vascular smooth muscle cells,” Nature Communications, 3 (2012), –11 02 (DOI: 10.1038/ncomms2087).


Bazzi, A., L. Zargarian, F. Chaminade, C. Boudier, H. De Rocquigny, B. René, Y. Mély, P. Fossé, and O. Mauffret 2011. “Structural insights into the cTAR DNA recognition by the HIV-1 nucleocapsid protein: Role of sugar deoxyriboses in the binding polarity of NC,” Nucleic Acids Research, 39/9 (2011), 3903–3916 (DOI: 10.1093/nar/gkq1290).

Bennouna-Greene, V., S. Kremer, C. Stoetzel, D. Christmann, C. Schuster, M. Durand, A. Verloes, S. Sigaudy, M. Holder-Espinasse, J. Godet, C. Brandt, V. Marion, A. Danion, J. L. Dietemann, and H. Dollfus 2011. “Hippocampal dysgenesis and variable neuropsychiatric phenotypes in patients with Bardet-Biedl syndrome underline complex CNS impact of primary cilia,” Clinical Genetics, 80/6 (2011), 523–531 (DOI: 10.1111/j.1399-0004.2011.01688.x).

Bolze, F., A. Hayek, X. H. Sun, P. L. Baldeck, C. Bourgogne, and J. F. Nicoud 2011. “New insight in boron chemistry: Application in two-photon absorption,” Optical Materials, 33/9 (2011), 1453–1458 (DOI: 10.1016/j.optmat.2011.02.035).

Budimir, A., N. Humbert, M. Elhabiri, I. Osinska, M. Biruš, and A. M. Albrecht-Gary 2011. “Hydroxyquinoline based binders: Promising ligands for chelatotherapy?” Journal of Inorganic Biochemistry, 105/3 (2011), 490–496 (DOI: 10.1016/j.jinorgbio.2010.08.014).

Chiantia, S., P. Schwille, A. S. Klymchenko, and E. London 2011. “Asymmetric GUVs prepared by M-beta-CD-mediated lipid exchange: An FCS study,” Biophysical Journal, 100/1 (2011), L1–L3 (DOI: 10.1016/j.bpj.2010.11.051).

Contal, E., A. S. Klymchenko, Y. Mély, S. Meunier, and A. Wagner 2011. “Core functionalization of polydiacetylene micelles by a "click" reaction,” Soft Matter, 7/5 (2011), 1648–1650 (DOI: 10.1039/c0sm00943a).

Darlix, J. L., J. Godet, R. Ivanyi-Nagy, P. Fossé, O. Mauffret, and Y. Mély 2011. “Flexible nature and specific functions of the HIV-1 nucleocapsid protein,” Journal of Molecular Biology, 410/4 (2011), 565–581 (DOI: 10.1016/j.jmb.2011.03.037).

Godet, J., N. Ramalanjaona, K. K. Sharma, L. Richert, H. De Rocquigny, J. L. Darlix, G. Duportail, and Y. Mély 2011. “Specific implications of the HIV-1 nucleocapsid zinc fingers in the annealing of the primer binding site complementary sequences during the obligatory plus strand transfer,” Nucleic Acids Research, 39/15 (2011), 6633–6645 (DOI: 10.1093/nar/gkr274).

Greiner, V. J., V. Shvadchak, J. Fritz, Y. Arntz, P. Didier, B. Frisch, C. Boudier, Y. Mély, and H. De Rocquigny 2011. “Characterization of the mechanisms of HIV-1 Vpr(52-96) internalization in cells,” Biochimie, 93/10 (2011), 1647–1658 (DOI: 10.1016/j.biochi.2011.05.033).

Grigorov, B., A. Bocquin, C. Gabus, S. Avilov, Y. Mély, A. Agopian, G. Divita, M. Gottikh, M. Witvrouw, and J. L. Darlix 2011. “Identification of a methylated oligoribonucleotide as a potent inhibitor of HIV-1 reverse transcription complex,” Nucleic Acids Research, 39/13 (2011), 5586–5596 (DOI: 10.1093/nar/gkr117).

Guichard, C., R. Ivanyi-Nagy, K. K. Sharma, C. Gabus, D. Marc, Y. Mély, and J. L. Darlix 2011. “Analysis of nucleic acid chaperoning by the prion protein and its inhibition by oligonucleotides,” Nucleic Acids Research, 39/19 (2011), 8544–8558 (DOI: 10.1093/nar/gkr554).

Kanevsky, I., F. Chaminade, Y. Chen, J. Godet, B. René, J. L. Darlix, Y. Mély, O. Mauffret, and P. Fossé 2011. “Structural determinants of TAR RNA-DNA annealing in the absence and presence of HIV-1 nucleocapsid protein,” Nucleic Acids Research, 39/18 (2011), 8148–8162 (DOI: 10.1093/nar/gkr526).

Lecat, S., M. Ouédraogo, T. Cherrier, F. Noulet, P. Rondé, N. Glasser, J. L. Galzi, Y. Mely, K. Takeda, and B. Bucher 2011. “Contribution of a tyrosine-based motif to cellular trafficking of wild-type and truncated NPY Y1 receptors,” Cellular Signalling, 23/1 (2011), 228–238 (DOI: 10.1016/j.cellsig.2010.09.007).

Mojzisova, H. and J. Vermot 2011. “When multiphoton microscopy sees near infrared,” Current Opinion in Genetics and Development, 21/5 (2011), 549–557 (DOI: 10.1016/j.gde.2011.08.004).

Nicoud, J. F., F. Bolze, X. H. Sun, A. Hayek, and P. Baldeck 2011. “Boron-containing two-photon-absorbing chromophores. 3. (1) One-and two-photon photophysical properties of p-carborane-containing fluorescent bioprobes,” Inorganic Chemistry, 50/10 (2011), 4272–4278 (DOI: 10.1021/ic102043v).

Postupalenko, V. Y., V. V. Shvadchak, G. Duportail, V. G. Pivovarenko, A. S. Klymchenko, and Y. Mély 2011. “Monitoring membrane binding and insertion of peptides by two-color fluorescent label,” Biochimica et Biophysica Acta - Biomembranes, 1808/1 (2011), 424–432 (DOI: 10.1016/j.bbamem.2010.09.013).

Rochel, N., F. Ciesielski, J. Godet, E. Moman, M. Roessle, C. Peluso-Iltis, M. Moulin, M. Haertlein, P. Callow, Y. Mély, D. I. Svergun, and D. Moras 2011. “Common architecture of nuclear receptor heterodimers on DNA direct repeat elements with different spacings,” Nature Structural and Molecular Biology, 18/5 (2011), 564–570 (DOI: 10.1038/nsmb.2054).

Rodik, R. V., A. S. Klymchenko, N. Jain, S. I. Miroshnichenko, L. Richert, V. I. Kalchenko, and Y. Mély 2011. “Virus-sized DNA nanoparticles for gene delivery based on micelles of cationic calixarenes,” Chemistry - A European Journal, 17/20 (2011), 5526–5538 (DOI: 10.1002/chem.201100154).

Schumann, G., R. Klauke, F. Canalias, S. Bossert-Reuther, P. F. H. Franck, F. J. Gella, P. J. Jørgensen, D. Kang, J. M. Lessinger, M. Panteghini, and F. Ceriotti 2011. “IFCC primary reference procedures for the measurement of catalytic activity concentrations of enzymes at 37°C. Part 9: Reference procedure for the measurement of catalytic concentration of alkaline phosphatase International Federation of Clinical Chemistry and Laboratory Medicine (IFCC) Scientific Division, Committee on Reference Systems of Enzymes (C-RSE) 1),” Clinical Chemistry and Laboratory Medicine, 49/9 (2011), 1439–1446 (DOI: 10.1515/CCLM.2011.621).

Vinet, L. and A. Zhedanov 2011. “A ’missing’ family of classical orthogonal polynomials,” Journal of Physics A: Mathematical and Theoretical, 44/8 (2011), 1689–1699 (DOI: 10.1088/1751-8113/44/8/085201).

Zamotaiev, O. M., V. Y. Postupalenko, V. V. Shvadchak, V. G. Pivovarenko, A. S. Klymchenko, and Y. Mély 2011. “Improved hydration-sensitive dual-fluorescence labels for monitoring peptide-nucleic acid interactions,” Bioconjugate Chemistry, 22/1 (2011), 101–107 (DOI: 10.1021/bc100434d).